Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHKAP35790 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHKAP35790 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHKAP35790 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.21■□□□□ 0.67
CHKAP35790 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHKAP35790 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHKAP35790 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHKAP35790 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHKAP35790 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.2■□□□□ 0.66
CHKAP35790 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHKAP35790 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.2■□□□□ 0.66
CHKAP35790 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHKAP35790 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CHKAP35790 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHKAP35790 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.2■□□□□ 0.66
CHKAP35790 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.2■□□□□ 0.66
CHKAP35790 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHKAP35790 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHKAP35790 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.2■□□□□ 0.66
CHKAP35790 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHKAP35790 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHKAP35790 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.2■□□□□ 0.66
CHKAP35790 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.2■□□□□ 0.66
CHKAP35790 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHKAP35790 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.2■□□□□ 0.66
CHKAP35790 AC135776.1-201ENST00000319817 2481 ntBASIC19.2■□□□□ 0.66
CHKAP35790 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.2■□□□□ 0.66
CHKAP35790 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHKAP35790 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHKAP35790 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHKAP35790 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CHKAP35790 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHKAP35790 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHKAP35790 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHKAP35790 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.19■□□□□ 0.66
CHKAP35790 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHKAP35790 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHKAP35790 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHKAP35790 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.19■□□□□ 0.66
CHKAP35790 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CHKAP35790 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.19■□□□□ 0.66
CHKAP35790 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.19■□□□□ 0.66
CHKAP35790 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.19■□□□□ 0.66
CHKAP35790 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.19■□□□□ 0.66
CHKAP35790 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.19■□□□□ 0.66
CHKAP35790 MIR3180-4-201ENST00000582223 153 ntBASIC19.19■□□□□ 0.66
CHKAP35790 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.19■□□□□ 0.66
CHKAP35790 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHKAP35790 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
CHKAP35790 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHKAP35790 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHKAP35790 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHKAP35790 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHKAP35790 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHKAP35790 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHKAP35790 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHKAP35790 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.19■□□□□ 0.66
CHKAP35790 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHKAP35790 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHKAP35790 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHKAP35790 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.18■□□□□ 0.66
CHKAP35790 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CHKAP35790 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.18■□□□□ 0.66
CHKAP35790 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CHKAP35790 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.18■□□□□ 0.66
CHKAP35790 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CHKAP35790 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CHKAP35790 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHKAP35790 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHKAP35790 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
CHKAP35790 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHKAP35790 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHKAP35790 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHKAP35790 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHKAP35790 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHKAP35790 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CHKAP35790 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.18■□□□□ 0.66
CHKAP35790 AC092597.1-201ENST00000487352 616 ntBASIC19.18■□□□□ 0.66
CHKAP35790 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
CHKAP35790 AC010240.3-201ENST00000607688 395 ntBASIC19.18■□□□□ 0.66
CHKAP35790 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHKAP35790 AL157888.1-201ENST00000631930 593 ntBASIC19.18■□□□□ 0.66
CHKAP35790 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHKAP35790 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHKAP35790 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHKAP35790 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.18■□□□□ 0.66
CHKAP35790 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHKAP35790 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.18■□□□□ 0.66
CHKAP35790 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CHKAP35790 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHKAP35790 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
CHKAP35790 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHKAP35790 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHKAP35790 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CHKAP35790 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CHKAP35790 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHKAP35790 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHKAP35790 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHKAP35790 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHKAP35790 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms