Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 KRT8P32-201ENST00000512863 1461 ntBASIC13.41□□□□□ -0.26
CKS2P33552 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 MYLKP1-201ENST00000509077 1580 ntBASIC13.41□□□□□ -0.26
CKS2P33552 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CKS2P33552 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CKS2P33552 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.4□□□□□ -0.26
CKS2P33552 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CKS2P33552 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.4□□□□□ -0.26
CKS2P33552 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CKS2P33552 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.4□□□□□ -0.26
CKS2P33552 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.4□□□□□ -0.26
CKS2P33552 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.4□□□□□ -0.26
CKS2P33552 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CKS2P33552 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.4□□□□□ -0.26
CKS2P33552 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CKS2P33552 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.4□□□□□ -0.26
CKS2P33552 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CKS2P33552 AC007326.2-201ENST00000624224 7579 ntBASIC13.4□□□□□ -0.26
CKS2P33552 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.4□□□□□ -0.26
CKS2P33552 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CKS2P33552 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
CKS2P33552 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CKS2P33552 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.39□□□□□ -0.27
CKS2P33552 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.39□□□□□ -0.27
CKS2P33552 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
CKS2P33552 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CKS2P33552 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
CKS2P33552 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
CKS2P33552 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CKS2P33552 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CKS2P33552 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 AC126755.1-201ENST00000525846 6405 ntBASIC13.39□□□□□ -0.27
CKS2P33552 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.39□□□□□ -0.27
CKS2P33552 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CKS2P33552 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.39□□□□□ -0.27
CKS2P33552 AC011767.1-201ENST00000617410 1153 ntBASIC13.39□□□□□ -0.27
CKS2P33552 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.39□□□□□ -0.27
CKS2P33552 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.39□□□□□ -0.27
CKS2P33552 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
CKS2P33552 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.39□□□□□ -0.27
CKS2P33552 AP001094.4-201ENST00000579008 2176 ntBASIC13.39□□□□□ -0.27
CKS2P33552 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CKS2P33552 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.39□□□□□ -0.27
CKS2P33552 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CKS2P33552 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CKS2P33552 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
CKS2P33552 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CKS2P33552 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CKS2P33552 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CKS2P33552 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.38□□□□□ -0.27
CKS2P33552 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.38□□□□□ -0.27
CKS2P33552 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.38□□□□□ -0.27
CKS2P33552 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.38□□□□□ -0.27
CKS2P33552 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms