Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.74■■□□□ 1.07
COL4A5P29400 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.74■■□□□ 1.07
COL4A5P29400 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL4A5P29400 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.74■■□□□ 1.07
COL4A5P29400 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A5P29400 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
COL4A5P29400 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A5P29400 KRT8P47-201ENST00000604727 1398 ntBASIC21.73■■□□□ 1.07
COL4A5P29400 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A5P29400 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A5P29400 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
COL4A5P29400 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.73■■□□□ 1.07
COL4A5P29400 AC254562.1-201ENST00000417586 456 ntBASIC21.73■■□□□ 1.07
COL4A5P29400 AC108073.2-201ENST00000464002 357 ntBASIC21.73■■□□□ 1.07
COL4A5P29400 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.73■■□□□ 1.07
COL4A5P29400 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
COL4A5P29400 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.73■■□□□ 1.07
COL4A5P29400 AC005829.1-201ENST00000570002 483 ntBASIC21.73■■□□□ 1.07
COL4A5P29400 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.73■■□□□ 1.07
COL4A5P29400 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
COL4A5P29400 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.73■■□□□ 1.07
COL4A5P29400 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
COL4A5P29400 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A5P29400 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A5P29400 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A5P29400 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A5P29400 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A5P29400 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A5P29400 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A5P29400 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A5P29400 AC097374.2-201ENST00000618617 1306 ntBASIC21.73■■□□□ 1.07
COL4A5P29400 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A5P29400 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.72■■□□□ 1.07
COL4A5P29400 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.72■■□□□ 1.07
COL4A5P29400 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.72■■□□□ 1.07
COL4A5P29400 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
COL4A5P29400 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.72■■□□□ 1.07
COL4A5P29400 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A5P29400 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A5P29400 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A5P29400 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A5P29400 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
COL4A5P29400 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.72■■□□□ 1.07
COL4A5P29400 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
COL4A5P29400 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A5P29400 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
COL4A5P29400 SPDYE21P-201ENST00000413323 827 ntBASIC21.72■■□□□ 1.07
COL4A5P29400 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21.72■■□□□ 1.07
COL4A5P29400 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.72■■□□□ 1.07
COL4A5P29400 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A5P29400 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.72■■□□□ 1.07
COL4A5P29400 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.72■■□□□ 1.07
COL4A5P29400 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.72■■□□□ 1.07
COL4A5P29400 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
COL4A5P29400 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.72■■□□□ 1.07
COL4A5P29400 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.72■■□□□ 1.07
COL4A5P29400 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.72■■□□□ 1.07
COL4A5P29400 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
COL4A5P29400 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
COL4A5P29400 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC21.72■■□□□ 1.07
COL4A5P29400 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A5P29400 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A5P29400 AC148477.5-201ENST00000625164 1645 ntBASIC21.72■■□□□ 1.07
COL4A5P29400 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.72■■□□□ 1.07
COL4A5P29400 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
COL4A5P29400 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.71■■□□□ 1.07
COL4A5P29400 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.71■■□□□ 1.07
COL4A5P29400 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.71■■□□□ 1.07
COL4A5P29400 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL4A5P29400 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.71■■□□□ 1.07
COL4A5P29400 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL4A5P29400 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
COL4A5P29400 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.71■■□□□ 1.07
COL4A5P29400 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL4A5P29400 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL4A5P29400 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL4A5P29400 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.71■■□□□ 1.07
COL4A5P29400 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.71■■□□□ 1.07
COL4A5P29400 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.71■■□□□ 1.07
COL4A5P29400 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL4A5P29400 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL4A5P29400 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
COL4A5P29400 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
COL4A5P29400 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.71■■□□□ 1.07
COL4A5P29400 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
COL4A5P29400 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.71■■□□□ 1.07
COL4A5P29400 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.71■■□□□ 1.07
COL4A5P29400 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.71■■□□□ 1.07
COL4A5P29400 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.71■■□□□ 1.07
COL4A5P29400 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL4A5P29400 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL4A5P29400 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL4A5P29400 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.7■■□□□ 1.06
COL4A5P29400 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.7■■□□□ 1.06
COL4A5P29400 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.7■■□□□ 1.06
COL4A5P29400 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.7■■□□□ 1.06
COL4A5P29400 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.7■■□□□ 1.06
COL4A5P29400 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC21.7■■□□□ 1.06
COL4A5P29400 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.7■■□□□ 1.06
COL4A5P29400 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms