Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BCKDHBP21953 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BCKDHBP21953 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BCKDHBP21953 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.94■□□□□ 0.46
BCKDHBP21953 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
BCKDHBP21953 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BCKDHBP21953 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BCKDHBP21953 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.93■□□□□ 0.46
BCKDHBP21953 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BCKDHBP21953 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BCKDHBP21953 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BCKDHBP21953 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BCKDHBP21953 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BCKDHBP21953 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.93■□□□□ 0.46
BCKDHBP21953 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BCKDHBP21953 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.93■□□□□ 0.46
BCKDHBP21953 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.93■□□□□ 0.46
BCKDHBP21953 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.93■□□□□ 0.46
BCKDHBP21953 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.93■□□□□ 0.46
BCKDHBP21953 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.93■□□□□ 0.46
BCKDHBP21953 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.93■□□□□ 0.46
BCKDHBP21953 MTDHP4-201ENST00000600287 670 ntBASIC17.93■□□□□ 0.46
BCKDHBP21953 AL139288.1-201ENST00000623748 933 ntBASIC17.93■□□□□ 0.46
BCKDHBP21953 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BCKDHBP21953 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.93■□□□□ 0.46
BCKDHBP21953 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.93■□□□□ 0.46
BCKDHBP21953 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BCKDHBP21953 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BCKDHBP21953 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BCKDHBP21953 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
BCKDHBP21953 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BCKDHBP21953 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BCKDHBP21953 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.92■□□□□ 0.46
BCKDHBP21953 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
BCKDHBP21953 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
BCKDHBP21953 AL499627.1-201ENST00000569373 2188 ntBASIC17.92■□□□□ 0.46
BCKDHBP21953 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
BCKDHBP21953 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.92■□□□□ 0.46
BCKDHBP21953 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BCKDHBP21953 AC007967.2-201ENST00000432613 625 ntBASIC17.92■□□□□ 0.46
BCKDHBP21953 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.92■□□□□ 0.46
BCKDHBP21953 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.92■□□□□ 0.46
BCKDHBP21953 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.92■□□□□ 0.46
BCKDHBP21953 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.92■□□□□ 0.46
BCKDHBP21953 AC112482.1-201ENST00000492080 688 ntBASIC17.92■□□□□ 0.46
BCKDHBP21953 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.92■□□□□ 0.46
BCKDHBP21953 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.92■□□□□ 0.46
BCKDHBP21953 UNC93B6-202ENST00000528242 690 ntBASIC17.92■□□□□ 0.46
BCKDHBP21953 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BCKDHBP21953 AC105339.3-201ENST00000560043 636 ntBASIC17.92■□□□□ 0.46
BCKDHBP21953 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.92■□□□□ 0.46
BCKDHBP21953 AP001160.2-201ENST00000596071 487 ntBASIC17.92■□□□□ 0.46
BCKDHBP21953 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.92■□□□□ 0.46
BCKDHBP21953 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.92■□□□□ 0.46
BCKDHBP21953 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
BCKDHBP21953 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BCKDHBP21953 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BCKDHBP21953 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BCKDHBP21953 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BCKDHBP21953 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BCKDHBP21953 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BCKDHBP21953 AFG3L1P-217ENST00000557444 2447 ntBASIC17.92■□□□□ 0.46
BCKDHBP21953 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.92■□□□□ 0.46
BCKDHBP21953 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BCKDHBP21953 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BCKDHBP21953 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
BCKDHBP21953 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
BCKDHBP21953 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.91■□□□□ 0.46
BCKDHBP21953 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
BCKDHBP21953 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BCKDHBP21953 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BCKDHBP21953 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
BCKDHBP21953 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
BCKDHBP21953 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.91■□□□□ 0.46
BCKDHBP21953 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
BCKDHBP21953 KRT18P65-201ENST00000439811 1286 ntBASIC17.91■□□□□ 0.46
BCKDHBP21953 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.91■□□□□ 0.46
BCKDHBP21953 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BCKDHBP21953 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
BCKDHBP21953 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.91■□□□□ 0.46
BCKDHBP21953 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.91■□□□□ 0.46
BCKDHBP21953 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BCKDHBP21953 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
BCKDHBP21953 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BCKDHBP21953 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
BCKDHBP21953 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BCKDHBP21953 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BCKDHBP21953 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BCKDHBP21953 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.91■□□□□ 0.46
BCKDHBP21953 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BCKDHBP21953 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BCKDHBP21953 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.9■□□□□ 0.46
BCKDHBP21953 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.9■□□□□ 0.46
BCKDHBP21953 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.9■□□□□ 0.46
BCKDHBP21953 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BCKDHBP21953 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.9■□□□□ 0.46
BCKDHBP21953 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
BCKDHBP21953 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BCKDHBP21953 PMS2P2-201ENST00000425039 1128 ntBASIC17.9■□□□□ 0.46
BCKDHBP21953 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms