Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC083906.6-201ENST00000641366 219 ntBASIC18.16■□□□□ 0.5
XRCC1P18887 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC1P18887 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.16■□□□□ 0.5
XRCC1P18887 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.16■□□□□ 0.5
XRCC1P18887 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC1P18887 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC1P18887 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
XRCC1P18887 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC1P18887 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC1P18887 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
XRCC1P18887 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XRCC1P18887 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
XRCC1P18887 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.15■□□□□ 0.5
XRCC1P18887 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
XRCC1P18887 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.15■□□□□ 0.5
XRCC1P18887 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC1P18887 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC1P18887 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC1P18887 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC1P18887 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC1P18887 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
XRCC1P18887 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
XRCC1P18887 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC1P18887 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC1P18887 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC1P18887 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.15■□□□□ 0.5
XRCC1P18887 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
XRCC1P18887 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC1P18887 SPDYE15P-201ENST00000424157 909 ntBASIC18.15■□□□□ 0.5
XRCC1P18887 KRT18P23-201ENST00000435622 1283 ntBASIC18.15■□□□□ 0.5
XRCC1P18887 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.15■□□□□ 0.5
XRCC1P18887 FAM86EP-206ENST00000510506 987 ntBASIC18.15■□□□□ 0.5
XRCC1P18887 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.15■□□□□ 0.5
XRCC1P18887 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.15■□□□□ 0.5
XRCC1P18887 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC1P18887 AC126763.1-201ENST00000552015 2118 ntBASIC18.15■□□□□ 0.5
XRCC1P18887 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.15■□□□□ 0.5
XRCC1P18887 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.15■□□□□ 0.5
XRCC1P18887 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC1P18887 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC1P18887 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
XRCC1P18887 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
XRCC1P18887 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
XRCC1P18887 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
XRCC1P18887 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.14■□□□□ 0.49
XRCC1P18887 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC1P18887 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
XRCC1P18887 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
XRCC1P18887 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC1P18887 AC034236.2-201ENST00000606662 1610 ntBASIC18.14■□□□□ 0.49
XRCC1P18887 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC1P18887 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC1P18887 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC1P18887 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC1P18887 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.14■□□□□ 0.49
XRCC1P18887 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.14■□□□□ 0.49
XRCC1P18887 AL358472.4-201ENST00000633140 710 ntBASIC18.14■□□□□ 0.49
XRCC1P18887 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC1P18887 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC1P18887 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.14■□□□□ 0.49
XRCC1P18887 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.14■□□□□ 0.49
XRCC1P18887 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC1P18887 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC1P18887 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.14■□□□□ 0.49
XRCC1P18887 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC1P18887 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC1P18887 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC1P18887 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC1P18887 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC1P18887 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
XRCC1P18887 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.13■□□□□ 0.49
XRCC1P18887 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC1P18887 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC1P18887 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
XRCC1P18887 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.13■□□□□ 0.49
XRCC1P18887 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.13■□□□□ 0.49
XRCC1P18887 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC1P18887 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC1P18887 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC1P18887 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.13■□□□□ 0.49
XRCC1P18887 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
XRCC1P18887 HEIH-201ENST00000623091 1652 ntBASIC18.13■□□□□ 0.49
XRCC1P18887 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC1P18887 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.13■□□□□ 0.49
XRCC1P18887 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC1P18887 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC1P18887 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.13■□□□□ 0.49
XRCC1P18887 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.13■□□□□ 0.49
XRCC1P18887 AC104390.1-201ENST00000555663 520 ntBASIC18.13■□□□□ 0.49
XRCC1P18887 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
XRCC1P18887 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC1P18887 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
XRCC1P18887 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.13■□□□□ 0.49
XRCC1P18887 AC073592.3-201ENST00000625118 1834 ntBASIC18.13■□□□□ 0.49
XRCC1P18887 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC1P18887 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC1P18887 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC1P18887 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.13■□□□□ 0.49
XRCC1P18887 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC1P18887 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms