Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.58□□□□□ -0.24
SMIM17P0DL12 SOX15-203ENST00000570788 1093 ntBASIC13.58□□□□□ -0.24
SMIM17P0DL12 AC008687.6-201ENST00000596318 630 ntBASIC13.58□□□□□ -0.24
SMIM17P0DL12 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.58□□□□□ -0.24
SMIM17P0DL12 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.58□□□□□ -0.24
SMIM17P0DL12 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.58□□□□□ -0.24
SMIM17P0DL12 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 AL596257.1-201ENST00000641463 2694 ntBASIC13.58□□□□□ -0.24
SMIM17P0DL12 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SMIM17P0DL12 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC13.58□□□□□ -0.24
SMIM17P0DL12 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.58□□□□□ -0.24
SMIM17P0DL12 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.58□□□□□ -0.24
SMIM17P0DL12 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SMIM17P0DL12 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
SMIM17P0DL12 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM17P0DL12 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.57□□□□□ -0.24
SMIM17P0DL12 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.57□□□□□ -0.24
SMIM17P0DL12 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.57□□□□□ -0.24
SMIM17P0DL12 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.57□□□□□ -0.24
SMIM17P0DL12 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 GNAS-203ENST00000306120 1878 ntBASIC13.57□□□□□ -0.24
SMIM17P0DL12 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.57□□□□□ -0.24
SMIM17P0DL12 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SMIM17P0DL12 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
SMIM17P0DL12 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.57□□□□□ -0.24
SMIM17P0DL12 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.57□□□□□ -0.24
SMIM17P0DL12 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 AC026271.2-201ENST00000428091 497 ntBASIC13.57□□□□□ -0.24
SMIM17P0DL12 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SMIM17P0DL12 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 PFKL-212ENST00000628044 129 ntTSL 3 BASIC13.57□□□□□ -0.24
SMIM17P0DL12 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.57□□□□□ -0.24
SMIM17P0DL12 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SMIM17P0DL12 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.57□□□□□ -0.24
SMIM17P0DL12 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.57□□□□□ -0.24
SMIM17P0DL12 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.57□□□□□ -0.24
SMIM17P0DL12 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.57□□□□□ -0.24
SMIM17P0DL12 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.57□□□□□ -0.24
SMIM17P0DL12 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM17P0DL12 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM17P0DL12 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
SMIM17P0DL12 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM17P0DL12 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM17P0DL12 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM17P0DL12 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM17P0DL12 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM17P0DL12 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SMIM17P0DL12 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM17P0DL12 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
SMIM17P0DL12 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM17P0DL12 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
SMIM17P0DL12 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SMIM17P0DL12 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM17P0DL12 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.56□□□□□ -0.24
SMIM17P0DL12 CDCA4P2-201ENST00000441182 718 ntBASIC13.56□□□□□ -0.24
SMIM17P0DL12 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.56□□□□□ -0.24
SMIM17P0DL12 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.56□□□□□ -0.24
SMIM17P0DL12 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.56□□□□□ -0.24
SMIM17P0DL12 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
SMIM17P0DL12 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM17P0DL12 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM17P0DL12 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SMIM17P0DL12 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.56□□□□□ -0.24
SMIM17P0DL12 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.56□□□□□ -0.24
SMIM17P0DL12 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms