Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.16■□□□□ 0.18
ERCC1P07992 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.16■□□□□ 0.18
ERCC1P07992 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ERCC1P07992 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.16■□□□□ 0.18
ERCC1P07992 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.16■□□□□ 0.18
ERCC1P07992 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC1P07992 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.16■□□□□ 0.18
ERCC1P07992 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ERCC1P07992 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
ERCC1P07992 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC1P07992 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC1P07992 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC1P07992 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC1P07992 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
ERCC1P07992 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC1P07992 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.15■□□□□ 0.18
ERCC1P07992 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC1P07992 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.15■□□□□ 0.18
ERCC1P07992 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC1P07992 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC1P07992 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC1P07992 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.15■□□□□ 0.18
ERCC1P07992 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
ERCC1P07992 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ERCC1P07992 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC1P07992 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC1P07992 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC1P07992 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC1P07992 RNF152P1-201ENST00000397754 604 ntBASIC16.15■□□□□ 0.18
ERCC1P07992 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.15■□□□□ 0.18
ERCC1P07992 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
ERCC1P07992 KRT18P35-201ENST00000510488 1269 ntBASIC16.15■□□□□ 0.18
ERCC1P07992 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC1P07992 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.15■□□□□ 0.18
ERCC1P07992 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.15■□□□□ 0.18
ERCC1P07992 AP003041.3-201ENST00000527151 707 ntBASIC16.15■□□□□ 0.18
ERCC1P07992 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC1P07992 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.15■□□□□ 0.18
ERCC1P07992 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC1P07992 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC1P07992 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC1P07992 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC1P07992 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ERCC1P07992 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ERCC1P07992 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC1P07992 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
ERCC1P07992 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ERCC1P07992 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
ERCC1P07992 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
ERCC1P07992 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
ERCC1P07992 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC1P07992 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.14■□□□□ 0.17
ERCC1P07992 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ERCC1P07992 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ERCC1P07992 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC1P07992 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ERCC1P07992 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.14■□□□□ 0.17
ERCC1P07992 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ERCC1P07992 INGX-201ENST00000359239 846 ntBASIC16.14■□□□□ 0.17
ERCC1P07992 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.14■□□□□ 0.17
ERCC1P07992 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC1P07992 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC1P07992 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.14■□□□□ 0.17
ERCC1P07992 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.14■□□□□ 0.17
ERCC1P07992 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC1P07992 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ERCC1P07992 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
ERCC1P07992 AC141257.4-201ENST00000634557 245 ntBASIC16.14■□□□□ 0.17
ERCC1P07992 AC136944.6-201ENST00000634818 245 ntBASIC16.14■□□□□ 0.17
ERCC1P07992 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ERCC1P07992 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ERCC1P07992 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.14■□□□□ 0.17
ERCC1P07992 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.14■□□□□ 0.17
ERCC1P07992 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC1P07992 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms