Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC14.66□□□□□ -0.06
APOC3P02656 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.66□□□□□ -0.06
APOC3P02656 DUX4L18-201ENST00000553347 1267 ntBASIC14.66□□□□□ -0.06
APOC3P02656 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
APOC3P02656 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.66□□□□□ -0.06
APOC3P02656 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
APOC3P02656 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC3P02656 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC3P02656 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.66□□□□□ -0.06
APOC3P02656 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
APOC3P02656 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC3P02656 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC3P02656 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
APOC3P02656 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOC3P02656 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
APOC3P02656 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC3P02656 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOC3P02656 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOC3P02656 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.66□□□□□ -0.06
APOC3P02656 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOC3P02656 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOC3P02656 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC3P02656 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC3P02656 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.65□□□□□ -0.06
APOC3P02656 TCAF2P1-201ENST00000291129 2421 ntBASIC14.65□□□□□ -0.06
APOC3P02656 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC3P02656 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.65□□□□□ -0.06
APOC3P02656 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
APOC3P02656 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOC3P02656 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
APOC3P02656 LYSMD4-203ENST00000378904 2122 ntBASIC14.65□□□□□ -0.06
APOC3P02656 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC3P02656 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC3P02656 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.65□□□□□ -0.06
APOC3P02656 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.65□□□□□ -0.06
APOC3P02656 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.65□□□□□ -0.06
APOC3P02656 AC024909.3-201ENST00000611513 2257 ntBASIC14.65□□□□□ -0.06
APOC3P02656 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC3P02656 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.65□□□□□ -0.06
APOC3P02656 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
APOC3P02656 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC3P02656 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.65□□□□□ -0.06
APOC3P02656 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOC3P02656 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOC3P02656 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC3P02656 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC3P02656 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
APOC3P02656 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOC3P02656 KRT16P2-201ENST00000414673 1423 ntBASIC14.65□□□□□ -0.06
APOC3P02656 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
APOC3P02656 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.65□□□□□ -0.06
APOC3P02656 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOC3P02656 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
APOC3P02656 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
APOC3P02656 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
APOC3P02656 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.64□□□□□ -0.07
APOC3P02656 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
APOC3P02656 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
APOC3P02656 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.64□□□□□ -0.07
APOC3P02656 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.64□□□□□ -0.07
APOC3P02656 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.64□□□□□ -0.07
APOC3P02656 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.64□□□□□ -0.07
APOC3P02656 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.64□□□□□ -0.07
APOC3P02656 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.64□□□□□ -0.07
APOC3P02656 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.64□□□□□ -0.07
APOC3P02656 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC14.64□□□□□ -0.07
APOC3P02656 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC14.64□□□□□ -0.07
APOC3P02656 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
APOC3P02656 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
APOC3P02656 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.64□□□□□ -0.07
APOC3P02656 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
APOC3P02656 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
APOC3P02656 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
APOC3P02656 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
APOC3P02656 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOC3P02656 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.64□□□□□ -0.07
APOC3P02656 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOC3P02656 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOC3P02656 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.63□□□□□ -0.07
APOC3P02656 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms