Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LGI1O95970 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.82■□□□□ 0.28
LGI1O95970 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.82■□□□□ 0.28
LGI1O95970 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGI1O95970 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGI1O95970 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGI1O95970 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.81■□□□□ 0.28
LGI1O95970 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGI1O95970 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LGI1O95970 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGI1O95970 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGI1O95970 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.81■□□□□ 0.28
LGI1O95970 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGI1O95970 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGI1O95970 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LGI1O95970 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LGI1O95970 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LGI1O95970 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.81■□□□□ 0.28
LGI1O95970 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LGI1O95970 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LGI1O95970 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGI1O95970 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGI1O95970 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.81■□□□□ 0.28
LGI1O95970 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGI1O95970 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGI1O95970 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LGI1O95970 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LGI1O95970 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGI1O95970 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LGI1O95970 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.81■□□□□ 0.28
LGI1O95970 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.8■□□□□ 0.28
LGI1O95970 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.8■□□□□ 0.28
LGI1O95970 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LGI1O95970 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LGI1O95970 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 BCL2-203ENST00000589955 5011 ntBASIC16.8■□□□□ 0.28
LGI1O95970 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
LGI1O95970 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LGI1O95970 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.8■□□□□ 0.28
LGI1O95970 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.8■□□□□ 0.28
LGI1O95970 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.8■□□□□ 0.28
LGI1O95970 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 C2orf69P3-201ENST00000565542 1120 ntBASIC16.8■□□□□ 0.28
LGI1O95970 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
LGI1O95970 AC010653.2-201ENST00000623505 997 ntBASIC16.8■□□□□ 0.28
LGI1O95970 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.8■□□□□ 0.28
LGI1O95970 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LGI1O95970 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LGI1O95970 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
LGI1O95970 AC006116.8-202ENST00000587620 1550 ntBASIC16.8■□□□□ 0.28
LGI1O95970 AC090340.1-201ENST00000620778 4980 ntBASIC16.8■□□□□ 0.28
LGI1O95970 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 KRT18P55-202ENST00000578578 1546 ntBASIC16.8■□□□□ 0.28
LGI1O95970 AL024508.2-201ENST00000607749 1894 ntBASIC16.8■□□□□ 0.28
LGI1O95970 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
LGI1O95970 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LGI1O95970 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LGI1O95970 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.79■□□□□ 0.28
LGI1O95970 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
LGI1O95970 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LGI1O95970 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LGI1O95970 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGI1O95970 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGI1O95970 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGI1O95970 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGI1O95970 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LGI1O95970 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LGI1O95970 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.79■□□□□ 0.28
LGI1O95970 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.79■□□□□ 0.28
LGI1O95970 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.79■□□□□ 0.28
LGI1O95970 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.79■□□□□ 0.28
LGI1O95970 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.79■□□□□ 0.28
LGI1O95970 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.79■□□□□ 0.28
LGI1O95970 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.79■□□□□ 0.28
LGI1O95970 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LGI1O95970 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGI1O95970 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LGI1O95970 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LGI1O95970 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LGI1O95970 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGI1O95970 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LGI1O95970 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LGI1O95970 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LGI1O95970 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms