Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLPXO76031 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLPXO76031 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.54■□□□□ 0.24
CLPXO76031 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLPXO76031 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLPXO76031 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.54■□□□□ 0.24
CLPXO76031 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLPXO76031 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLPXO76031 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLPXO76031 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLPXO76031 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLPXO76031 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLPXO76031 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLPXO76031 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLPXO76031 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLPXO76031 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLPXO76031 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CLPXO76031 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLPXO76031 PCDHA1-201ENST00000378133 2726 ntBASIC16.54■□□□□ 0.24
CLPXO76031 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLPXO76031 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLPXO76031 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLPXO76031 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLPXO76031 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.53■□□□□ 0.24
CLPXO76031 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
CLPXO76031 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CLPXO76031 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLPXO76031 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLPXO76031 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLPXO76031 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.53■□□□□ 0.24
CLPXO76031 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLPXO76031 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.53■□□□□ 0.24
CLPXO76031 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CLPXO76031 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.53■□□□□ 0.24
CLPXO76031 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLPXO76031 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.53■□□□□ 0.24
CLPXO76031 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLPXO76031 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLPXO76031 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CLPXO76031 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLPXO76031 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLPXO76031 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.53■□□□□ 0.24
CLPXO76031 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLPXO76031 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.53■□□□□ 0.24
CLPXO76031 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.53■□□□□ 0.24
CLPXO76031 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLPXO76031 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLPXO76031 AC093827.2-201ENST00000512654 315 ntBASIC16.53■□□□□ 0.24
CLPXO76031 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.53■□□□□ 0.24
CLPXO76031 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.53■□□□□ 0.24
CLPXO76031 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CLPXO76031 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.53■□□□□ 0.24
CLPXO76031 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.53■□□□□ 0.24
CLPXO76031 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.53■□□□□ 0.24
CLPXO76031 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLPXO76031 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CLPXO76031 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLPXO76031 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.53■□□□□ 0.24
CLPXO76031 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLPXO76031 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CLPXO76031 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLPXO76031 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLPXO76031 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CLPXO76031 CROCCP1-201ENST00000426910 5675 ntBASIC16.52■□□□□ 0.24
CLPXO76031 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLPXO76031 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.52■□□□□ 0.24
CLPXO76031 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CLPXO76031 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLPXO76031 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.52■□□□□ 0.24
CLPXO76031 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.52■□□□□ 0.24
CLPXO76031 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CLPXO76031 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLPXO76031 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLPXO76031 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.52■□□□□ 0.24
CLPXO76031 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.52■□□□□ 0.24
CLPXO76031 AC097658.1-201ENST00000475555 843 ntBASIC16.52■□□□□ 0.24
CLPXO76031 AC091874.3-201ENST00000512672 1195 ntBASIC16.52■□□□□ 0.24
CLPXO76031 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLPXO76031 MYC-209ENST00000641252 345 ntBASIC16.52■□□□□ 0.24
CLPXO76031 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLPXO76031 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLPXO76031 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLPXO76031 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLPXO76031 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLPXO76031 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
CLPXO76031 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
CLPXO76031 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLPXO76031 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLPXO76031 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLPXO76031 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.52■□□□□ 0.23
CLPXO76031 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CLPXO76031 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CLPXO76031 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.51■□□□□ 0.23
CLPXO76031 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CLPXO76031 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLPXO76031 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.51■□□□□ 0.23
CLPXO76031 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CLPXO76031 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLPXO76031 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLPXO76031 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms