Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
UPK2O00526 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UPK2O00526 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK2O00526 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UPK2O00526 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
UPK2O00526 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK2O00526 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK2O00526 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK2O00526 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK2O00526 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.62□□□□□ -0.07
UPK2O00526 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK2O00526 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK2O00526 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
UPK2O00526 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK2O00526 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK2O00526 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK2O00526 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK2O00526 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK2O00526 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK2O00526 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UPK2O00526 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK2O00526 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK2O00526 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK2O00526 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK2O00526 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
UPK2O00526 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK2O00526 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK2O00526 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK2O00526 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK2O00526 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK2O00526 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.61□□□□□ -0.07
UPK2O00526 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.61□□□□□ -0.07
UPK2O00526 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.61□□□□□ -0.07
UPK2O00526 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK2O00526 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UPK2O00526 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.61□□□□□ -0.07
UPK2O00526 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK2O00526 AC010653.2-201ENST00000623505 997 ntBASIC14.61□□□□□ -0.07
UPK2O00526 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
UPK2O00526 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UPK2O00526 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
UPK2O00526 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK2O00526 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.61□□□□□ -0.07
UPK2O00526 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
UPK2O00526 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK2O00526 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK2O00526 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
UPK2O00526 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK2O00526 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK2O00526 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
UPK2O00526 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK2O00526 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UPK2O00526 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
UPK2O00526 KRT18P55-202ENST00000578578 1546 ntBASIC14.61□□□□□ -0.07
UPK2O00526 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UPK2O00526 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.61□□□□□ -0.07
UPK2O00526 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.6□□□□□ -0.07
UPK2O00526 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
UPK2O00526 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.6□□□□□ -0.07
UPK2O00526 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.6□□□□□ -0.07
UPK2O00526 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.6□□□□□ -0.07
UPK2O00526 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
UPK2O00526 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.6□□□□□ -0.07
UPK2O00526 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.6□□□□□ -0.07
UPK2O00526 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.6□□□□□ -0.07
UPK2O00526 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.6□□□□□ -0.07
UPK2O00526 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.6□□□□□ -0.07
UPK2O00526 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.6□□□□□ -0.07
UPK2O00526 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.6□□□□□ -0.07
UPK2O00526 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
UPK2O00526 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.6□□□□□ -0.07
UPK2O00526 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
UPK2O00526 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
UPK2O00526 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UPK2O00526 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms