Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EIF3FO00303 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.79■□□□□ 0.44
EIF3FO00303 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.79■□□□□ 0.44
EIF3FO00303 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.79■□□□□ 0.44
EIF3FO00303 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EIF3FO00303 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
EIF3FO00303 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.79■□□□□ 0.44
EIF3FO00303 AC099343.3-201ENST00000605834 2503 ntBASIC17.79■□□□□ 0.44
EIF3FO00303 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
EIF3FO00303 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.79■□□□□ 0.44
EIF3FO00303 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EIF3FO00303 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EIF3FO00303 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EIF3FO00303 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.79■□□□□ 0.44
EIF3FO00303 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
EIF3FO00303 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.79■□□□□ 0.44
EIF3FO00303 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EIF3FO00303 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
EIF3FO00303 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.78■□□□□ 0.44
EIF3FO00303 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.78■□□□□ 0.44
EIF3FO00303 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.78■□□□□ 0.44
EIF3FO00303 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.78■□□□□ 0.44
EIF3FO00303 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
EIF3FO00303 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.78■□□□□ 0.44
EIF3FO00303 KRT18P57-201ENST00000443599 1254 ntBASIC17.78■□□□□ 0.44
EIF3FO00303 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.78■□□□□ 0.44
EIF3FO00303 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.78■□□□□ 0.44
EIF3FO00303 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.78■□□□□ 0.44
EIF3FO00303 AC006011.2-201ENST00000621313 1158 ntBASIC17.78■□□□□ 0.44
EIF3FO00303 AC079602.3-201ENST00000623931 403 ntBASIC17.78■□□□□ 0.44
EIF3FO00303 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
EIF3FO00303 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
EIF3FO00303 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 AC008764.6-201ENST00000595909 2069 ntBASIC17.78■□□□□ 0.44
EIF3FO00303 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
EIF3FO00303 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
EIF3FO00303 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EIF3FO00303 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
EIF3FO00303 KRT18P55-202ENST00000578578 1546 ntBASIC17.77■□□□□ 0.44
EIF3FO00303 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EIF3FO00303 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
EIF3FO00303 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
EIF3FO00303 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EIF3FO00303 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EIF3FO00303 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EIF3FO00303 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.77■□□□□ 0.44
EIF3FO00303 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EIF3FO00303 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
EIF3FO00303 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
EIF3FO00303 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EIF3FO00303 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EIF3FO00303 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EIF3FO00303 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.77■□□□□ 0.44
EIF3FO00303 AK4P3-201ENST00000418260 669 ntBASIC17.77■□□□□ 0.44
EIF3FO00303 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EIF3FO00303 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.77■□□□□ 0.44
EIF3FO00303 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.77■□□□□ 0.44
EIF3FO00303 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.77■□□□□ 0.44
EIF3FO00303 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.77■□□□□ 0.44
EIF3FO00303 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.77■□□□□ 0.44
EIF3FO00303 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.77■□□□□ 0.44
EIF3FO00303 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.77■□□□□ 0.44
EIF3FO00303 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EIF3FO00303 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
EIF3FO00303 LINC00167-201ENST00000530583 1419 ntBASIC17.77■□□□□ 0.44
EIF3FO00303 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EIF3FO00303 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EIF3FO00303 AL133373.2-201ENST00000623187 2828 ntBASIC17.77■□□□□ 0.44
EIF3FO00303 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EIF3FO00303 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
EIF3FO00303 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
EIF3FO00303 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.77■□□□□ 0.43
EIF3FO00303 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
EIF3FO00303 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
EIF3FO00303 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.77■□□□□ 0.43
EIF3FO00303 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
EIF3FO00303 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
EIF3FO00303 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms