Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 AC007322.1-201ENST00000426983 750 ntBASIC12.95□□□□□ -0.34
LINC01549A6NIU2 APTR-203ENST00000430801 583 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 PNN-205ENST00000556530 601 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 MDK-213ENST00000617138 635 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 AL162727.3-201ENST00000635661 2787 ntBASIC12.95□□□□□ -0.34
LINC01549A6NIU2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01549A6NIU2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 AC137761.2-201ENST00000561729 223 ntBASIC12.94□□□□□ -0.34
LINC01549A6NIU2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 AC145350.3-201ENST00000569033 163 ntBASIC12.94□□□□□ -0.34
LINC01549A6NIU2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 NTF6G-201ENST00000591094 616 ntBASIC12.94□□□□□ -0.34
LINC01549A6NIU2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 AC063926.3-201ENST00000624734 5658 ntBASIC12.94□□□□□ -0.34
LINC01549A6NIU2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01549A6NIU2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms