Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 KRT89P-201ENST00000620027 1478 ntBASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-28A0A0C4DH34 KRT18P1-202ENST00000452408 1331 ntBASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 AC126763.1-201ENST00000552015 2118 ntBASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 AP002414.4-201ENST00000589764 1148 ntBASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 NPAP1P7-201ENST00000613027 823 ntBASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-28A0A0C4DH34 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
IGHV4-28A0A0C4DH34 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV4-28A0A0C4DH34 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV4-28A0A0C4DH34 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV4-28A0A0C4DH34 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV4-28A0A0C4DH34 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV4-28A0A0C4DH34 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV4-28A0A0C4DH34 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV4-28A0A0C4DH34 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV4-28A0A0C4DH34 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV4-28A0A0C4DH34 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.12□□□□□ -0.31
IGHV4-28A0A0C4DH34 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV4-28A0A0C4DH34 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.12□□□□□ -0.31
IGHV4-28A0A0C4DH34 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV4-28A0A0C4DH34 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV4-28A0A0C4DH34 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
IGHV4-28A0A0C4DH34 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV4-28A0A0C4DH34 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms