Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV5A0A0B4J249 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 KSR1P1-201ENST00000446298 240 ntBASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 FAM207BP-201ENST00000447172 505 ntBASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV5A0A0B4J249 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 AP000593.1-201ENST00000393668 712 ntBASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 AC130371.2-201ENST00000619443 611 ntBASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 AC006116.8-202ENST00000587620 1550 ntBASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV5A0A0B4J249 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 KRT8P50-201ENST00000562022 1438 ntBASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV5A0A0B4J249 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms