Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 AL354751.1-201ENST00000412768 1863 ntBASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 LINC01568-207ENST00000641790 1380 ntBASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 INGX-201ENST00000359239 846 ntBASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 ECEL1P2-202ENST00000465689 757 ntBASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV1A0A0A0MS02 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 AC135776.1-201ENST00000319817 2481 ntBASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 HMGA1P5-201ENST00000412453 271 ntBASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 GMCL1P1-201ENST00000463439 1581 ntBASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 AL163051.1-201ENST00000569214 1512 ntBASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 AC009102.3-201ENST00000623118 1491 ntBASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 HOXB1-202ENST00000577092 1414 ntBASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV1A0A0A0MS02 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms