Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 AC106820.2-201ENST00000563775 3264 ntBASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX49Q9Y6V7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 CCR12P-201ENST00000446203 998 ntBASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 CKBP1-201ENST00000565489 1086 ntBASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 AC011558.1-201ENST00000623459 338 ntBASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 KRT8P11-201ENST00000409686 1436 ntBASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
DDX49Q9Y6V7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 AL358472.4-201ENST00000633140 710 ntBASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 AC141257.4-201ENST00000634557 245 ntBASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 AC136944.6-201ENST00000634818 245 ntBASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 LINC00896-202ENST00000609602 2128 ntBASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.86■■□□□ 1.09
DDX49Q9Y6V7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 AP003041.3-201ENST00000527151 707 ntBASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 AL353719.1-201ENST00000566847 864 ntBASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 AL023973.1-201ENST00000624619 620 ntBASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 MYC-208ENST00000641036 567 ntBASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 AC134043.2-201ENST00000624206 2238 ntBASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DDX49Q9Y6V7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 KRT8P45-201ENST00000414328 1447 ntBASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX49Q9Y6V7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms