Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSNK1G3Q9Y6M4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 NUS1P2-201ENST00000417358 873 ntBASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 SLC25A6P4-201ENST00000586535 553 ntBASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSNK1G3Q9Y6M4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 MYLKP1-201ENST00000509077 1580 ntBASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 AKR1C7P-201ENST00000305623 895 ntBASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 AC064862.7-201ENST00000604520 867 ntBASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.79■□□□□ 0.44
CSNK1G3Q9Y6M4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 TSPY12P-201ENST00000421279 868 ntBASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 BNIP3P18-201ENST00000593976 575 ntBASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1G3Q9Y6M4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 AC093503.3-201ENST00000624917 2352 ntBASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1G3Q9Y6M4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms