Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 KRT18P65-201ENST00000439811 1286 ntBASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 AC090616.6-201ENST00000582640 721 ntBASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 AP002414.4-201ENST00000589764 1148 ntBASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 AC009154.2-201ENST00000621177 724 ntBASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 ABALON-201ENST00000629058 1903 ntBASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 TSPY12P-201ENST00000421279 868 ntBASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 AC091607.1-201ENST00000490318 1060 ntBASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 AC093458.2-201ENST00000623150 629 ntBASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN16Q9Y5I7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLDN16Q9Y5I7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLDN16Q9Y5I7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLDN16Q9Y5I7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.89■□□□□ 0.3
CLDN16Q9Y5I7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.89■□□□□ 0.3
CLDN16Q9Y5I7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
CLDN16Q9Y5I7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 AP005901.3-202ENST00000581653 237 ntBASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 AC092119.3-201ENST00000612618 583 ntBASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN16Q9Y5I7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN16Q9Y5I7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLDN16Q9Y5I7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CLDN16Q9Y5I7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN16Q9Y5I7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN16Q9Y5I7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN16Q9Y5I7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN16Q9Y5I7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN16Q9Y5I7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN16Q9Y5I7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN16Q9Y5I7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN16Q9Y5I7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLDN16Q9Y5I7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms