Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.76□□□□□ -0.05
FOXA2Q9Y261 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.76□□□□□ -0.05
FOXA2Q9Y261 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
FOXA2Q9Y261 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
FOXA2Q9Y261 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FOXA2Q9Y261 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FOXA2Q9Y261 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
FOXA2Q9Y261 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FOXA2Q9Y261 AL096828.2-201ENST00000567259 1965 ntBASIC14.76□□□□□ -0.05
FOXA2Q9Y261 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.76□□□□□ -0.05
FOXA2Q9Y261 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FOXA2Q9Y261 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FOXA2Q9Y261 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
FOXA2Q9Y261 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
FOXA2Q9Y261 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
FOXA2Q9Y261 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
FOXA2Q9Y261 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 AL512604.3-201ENST00000569583 964 ntBASIC14.75□□□□□ -0.05
FOXA2Q9Y261 MIR3180-5-201ENST00000583743 153 ntBASIC14.75□□□□□ -0.05
FOXA2Q9Y261 LINC01023-201ENST00000606054 436 ntBASIC14.75□□□□□ -0.05
FOXA2Q9Y261 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
FOXA2Q9Y261 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 HMGA1P5-201ENST00000412453 271 ntBASIC14.74□□□□□ -0.05
FOXA2Q9Y261 AC211429.1-201ENST00000415277 523 ntBASIC14.74□□□□□ -0.05
FOXA2Q9Y261 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 ECEL1P2-202ENST00000465689 757 ntBASIC14.74□□□□□ -0.05
FOXA2Q9Y261 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 LINC00896-202ENST00000609602 2128 ntBASIC14.74□□□□□ -0.05
FOXA2Q9Y261 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
FOXA2Q9Y261 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.73□□□□□ -0.05
FOXA2Q9Y261 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
FOXA2Q9Y261 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms