Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF6Q9Y252 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
RNF6Q9Y252 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF6Q9Y252 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF6Q9Y252 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RNF6Q9Y252 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF6Q9Y252 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RNF6Q9Y252 AC007663.1-201ENST00000438948 1240 ntBASIC17.18■□□□□ 0.34
RNF6Q9Y252 Z85996.1-201ENST00000494644 937 ntBASIC17.18■□□□□ 0.34
RNF6Q9Y252 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF6Q9Y252 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF6Q9Y252 AL138966.2-201ENST00000621997 464 ntBASIC17.18■□□□□ 0.34
RNF6Q9Y252 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RNF6Q9Y252 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF6Q9Y252 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RNF6Q9Y252 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RNF6Q9Y252 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF6Q9Y252 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF6Q9Y252 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF6Q9Y252 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF6Q9Y252 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF6Q9Y252 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF6Q9Y252 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF6Q9Y252 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF6Q9Y252 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF6Q9Y252 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF6Q9Y252 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
RNF6Q9Y252 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF6Q9Y252 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF6Q9Y252 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF6Q9Y252 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF6Q9Y252 AC134043.2-201ENST00000624206 2238 ntBASIC17.17■□□□□ 0.34
RNF6Q9Y252 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF6Q9Y252 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF6Q9Y252 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF6Q9Y252 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RNF6Q9Y252 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF6Q9Y252 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF6Q9Y252 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.17■□□□□ 0.34
RNF6Q9Y252 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF6Q9Y252 RNF152P1-201ENST00000397754 604 ntBASIC17.17■□□□□ 0.34
RNF6Q9Y252 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.17■□□□□ 0.34
RNF6Q9Y252 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF6Q9Y252 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.17■□□□□ 0.34
RNF6Q9Y252 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF6Q9Y252 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF6Q9Y252 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF6Q9Y252 AC010653.2-201ENST00000623505 997 ntBASIC17.17■□□□□ 0.34
RNF6Q9Y252 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF6Q9Y252 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF6Q9Y252 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF6Q9Y252 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF6Q9Y252 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF6Q9Y252 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF6Q9Y252 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF6Q9Y252 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RNF6Q9Y252 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF6Q9Y252 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF6Q9Y252 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF6Q9Y252 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF6Q9Y252 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF6Q9Y252 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RNF6Q9Y252 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF6Q9Y252 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF6Q9Y252 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.16■□□□□ 0.34
RNF6Q9Y252 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF6Q9Y252 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF6Q9Y252 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF6Q9Y252 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.16■□□□□ 0.34
RNF6Q9Y252 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF6Q9Y252 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF6Q9Y252 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RNF6Q9Y252 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF6Q9Y252 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF6Q9Y252 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF6Q9Y252 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
RNF6Q9Y252 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF6Q9Y252 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.16■□□□□ 0.34
RNF6Q9Y252 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF6Q9Y252 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
RNF6Q9Y252 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF6Q9Y252 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RNF6Q9Y252 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF6Q9Y252 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RNF6Q9Y252 AC099398.1-201ENST00000567919 2776 ntBASIC17.15■□□□□ 0.34
RNF6Q9Y252 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.15■□□□□ 0.34
RNF6Q9Y252 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF6Q9Y252 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF6Q9Y252 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF6Q9Y252 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF6Q9Y252 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.15■□□□□ 0.34
RNF6Q9Y252 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF6Q9Y252 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF6Q9Y252 FAM8A6P-201ENST00000407496 1135 ntBASIC17.15■□□□□ 0.34
RNF6Q9Y252 YBX1P2-201ENST00000489612 999 ntBASIC17.15■□□□□ 0.34
RNF6Q9Y252 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RNF6Q9Y252 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF6Q9Y252 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF6Q9Y252 AL358472.4-201ENST00000633140 710 ntBASIC17.15■□□□□ 0.34
RNF6Q9Y252 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms