Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 AP000997.3-201ENST00000623333 2250 ntBASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 FAM210CP-201ENST00000445714 574 ntBASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 KRT18P21-201ENST00000515767 1272 ntBASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHGC3Q9UN70 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.66
PCDHGC3Q9UN70 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 LINC01311-201ENST00000565162 1445 ntBASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 SPDYE13P-201ENST00000445314 798 ntBASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 AC083849.1-201ENST00000615227 514 ntBASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGC3Q9UN70 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 LINC00602-201ENST00000629776 2065 ntBASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms