Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 CHCHD2P8-201ENST00000429873 447 ntBASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 AC092119.3-201ENST00000612618 583 ntBASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.52■□□□□ 0.4
SPHK1Q9NYA1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SPHK1Q9NYA1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SPHK1Q9NYA1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
SPHK1Q9NYA1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SPHK1Q9NYA1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.52■□□□□ 0.39
SPHK1Q9NYA1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SPHK1Q9NYA1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SPHK1Q9NYA1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 ATP5G2P1-201ENST00000433580 426 ntBASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 MIR3180-1-201ENST00000580374 94 ntBASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 MIR3180-3-201ENST00000584616 94 ntBASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 AC093677.2-201ENST00000600169 1863 ntBASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPHK1Q9NYA1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 LINC00167-201ENST00000530583 1419 ntBASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 AP002414.4-201ENST00000589764 1148 ntBASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 AC020763.4-201ENST00000623414 4170 ntBASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPHK1Q9NYA1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
SPHK1Q9NYA1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms