Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRTM1Q9HBL6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 MIR1238-201ENST00000408483 83 ntBASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRTM1Q9HBL6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 LINC00896-202ENST00000609602 2128 ntBASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 AC007663.1-201ENST00000438948 1240 ntBASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 C2orf69P3-201ENST00000565542 1120 ntBASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 AC112497.1-201ENST00000624824 639 ntBASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRTM1Q9HBL6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 AC093010.1-201ENST00000473625 1624 ntBASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 LINC01126-201ENST00000623515 1646 ntBASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 AC104390.1-201ENST00000555663 520 ntBASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRTM1Q9HBL6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRTM1Q9HBL6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms