Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 AC009102.3-201ENST00000623118 1491 ntBASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 TSPY15P-201ENST00000457163 923 ntBASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 AC112497.1-201ENST00000624824 639 ntBASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 AC018470.1-201ENST00000624790 3129 ntBASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 AL163051.1-201ENST00000569214 1512 ntBASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 FZD10-202ENST00000539839 3282 ntBASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 MIR149-201ENST00000384879 89 ntBASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC68Q9H2F9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC68Q9H2F9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC68Q9H2F9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
CCDC68Q9H2F9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 KRT8P9-201ENST00000558927 1449 ntBASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 AL596275.1-201ENST00000423464 877 ntBASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 AC010947.1-201ENST00000623454 693 ntBASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 AC066615.1-201ENST00000640911 628 ntBASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC68Q9H2F9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC68Q9H2F9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms