Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 EML3-216ENST00000529309 2909 ntTSL 2 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC10.88□□□□□ -0.67
LIMD2Q9BT23 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 KRT8P3-201ENST00000519669 1449 ntBASIC10.87□□□□□ -0.67
LIMD2Q9BT23 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 AC012618.2-201ENST00000428058 849 ntBASIC10.87□□□□□ -0.67
LIMD2Q9BT23 TSPY20P-201ENST00000450910 630 ntBASIC10.87□□□□□ -0.67
LIMD2Q9BT23 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LIMD2Q9BT23 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 SIRPAP1-201ENST00000448467 1770 ntBASIC10.86□□□□□ -0.67
LIMD2Q9BT23 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 AL158047.1-201ENST00000445918 881 ntBASIC10.86□□□□□ -0.67
LIMD2Q9BT23 AC091390.4-202ENST00000476426 537 ntBASIC10.86□□□□□ -0.67
LIMD2Q9BT23 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LIMD2Q9BT23 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms