Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDF1Q96CC6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDF1Q96CC6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDF1Q96CC6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.75■□□□□ 0.43
RHBDF1Q96CC6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDF1Q96CC6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.75■□□□□ 0.43
RHBDF1Q96CC6 LTB4R2-202ENST00000528054 3092 ntBASIC17.75■□□□□ 0.43
RHBDF1Q96CC6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.75■□□□□ 0.43
RHBDF1Q96CC6 AC067852.2-201ENST00000590513 2313 ntBASIC17.75■□□□□ 0.43
RHBDF1Q96CC6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RHBDF1Q96CC6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RHBDF1Q96CC6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RHBDF1Q96CC6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 GCSHP2-201ENST00000560971 527 ntBASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 AL157888.1-201ENST00000631930 593 ntBASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDF1Q96CC6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDF1Q96CC6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 LIN28AP1-201ENST00000429574 405 ntBASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 PVRIG2P-201ENST00000435460 978 ntBASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.72■□□□□ 0.43
RHBDF1Q96CC6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms