Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP6NLQ92738 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP6NLQ92738 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP6NLQ92738 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
USP6NLQ92738 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP6NLQ92738 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP6NLQ92738 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP6NLQ92738 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP6NLQ92738 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.57■□□□□ 0.88
USP6NLQ92738 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.57■□□□□ 0.88
USP6NLQ92738 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP6NLQ92738 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
USP6NLQ92738 AC008735.5-201ENST00000623544 497 ntBASIC20.57■□□□□ 0.88
USP6NLQ92738 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP6NLQ92738 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP6NLQ92738 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP6NLQ92738 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
USP6NLQ92738 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP6NLQ92738 AC007952.6-201ENST00000573168 2673 ntBASIC20.57■□□□□ 0.88
USP6NLQ92738 AC003957.1-201ENST00000625108 2673 ntBASIC20.57■□□□□ 0.88
USP6NLQ92738 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.56■□□□□ 0.88
USP6NLQ92738 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.56■□□□□ 0.88
USP6NLQ92738 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP6NLQ92738 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP6NLQ92738 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP6NLQ92738 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP6NLQ92738 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
USP6NLQ92738 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP6NLQ92738 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP6NLQ92738 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP6NLQ92738 GPX1P2-201ENST00000429271 606 ntBASIC20.56■□□□□ 0.88
USP6NLQ92738 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.56■□□□□ 0.88
USP6NLQ92738 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.56■□□□□ 0.88
USP6NLQ92738 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.56■□□□□ 0.88
USP6NLQ92738 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP6NLQ92738 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
USP6NLQ92738 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP6NLQ92738 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP6NLQ92738 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP6NLQ92738 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
USP6NLQ92738 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP6NLQ92738 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.56■□□□□ 0.88
USP6NLQ92738 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6NLQ92738 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6NLQ92738 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP6NLQ92738 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6NLQ92738 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
USP6NLQ92738 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP6NLQ92738 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.55■□□□□ 0.88
USP6NLQ92738 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.55■□□□□ 0.88
USP6NLQ92738 KRT18P3-201ENST00000451602 1288 ntBASIC20.55■□□□□ 0.88
USP6NLQ92738 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
USP6NLQ92738 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.55■□□□□ 0.88
USP6NLQ92738 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.55■□□□□ 0.88
USP6NLQ92738 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.55■□□□□ 0.88
USP6NLQ92738 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.55■□□□□ 0.88
USP6NLQ92738 AL139288.1-201ENST00000623748 933 ntBASIC20.55■□□□□ 0.88
USP6NLQ92738 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.55■□□□□ 0.88
USP6NLQ92738 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6NLQ92738 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6NLQ92738 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
USP6NLQ92738 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6NLQ92738 MYLKP1-201ENST00000509077 1580 ntBASIC20.55■□□□□ 0.88
USP6NLQ92738 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6NLQ92738 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP6NLQ92738 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.54■□□□□ 0.88
USP6NLQ92738 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP6NLQ92738 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.54■□□□□ 0.88
USP6NLQ92738 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
USP6NLQ92738 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.54■□□□□ 0.88
USP6NLQ92738 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP6NLQ92738 YBX2P1-201ENST00000394192 760 ntBASIC20.54■□□□□ 0.88
USP6NLQ92738 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.54■□□□□ 0.88
USP6NLQ92738 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP6NLQ92738 AC112482.1-201ENST00000492080 688 ntBASIC20.54■□□□□ 0.88
USP6NLQ92738 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.54■□□□□ 0.88
USP6NLQ92738 AC010327.4-202ENST00000591484 748 ntBASIC20.54■□□□□ 0.88
USP6NLQ92738 AP001160.2-201ENST00000596071 487 ntBASIC20.54■□□□□ 0.88
USP6NLQ92738 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP6NLQ92738 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP6NLQ92738 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP6NLQ92738 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP6NLQ92738 AC099343.3-201ENST00000605834 2503 ntBASIC20.54■□□□□ 0.88
USP6NLQ92738 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP6NLQ92738 LINC00602-201ENST00000629776 2065 ntBASIC20.54■□□□□ 0.88
USP6NLQ92738 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
USP6NLQ92738 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP6NLQ92738 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.53■□□□□ 0.88
USP6NLQ92738 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP6NLQ92738 HMGN1P19-201ENST00000436976 333 ntBASIC20.53■□□□□ 0.88
USP6NLQ92738 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP6NLQ92738 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.53■□□□□ 0.88
USP6NLQ92738 NKAPP1-205ENST00000585790 367 ntBASIC20.53■□□□□ 0.88
USP6NLQ92738 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP6NLQ92738 AC107918.4-202ENST00000641623 219 ntBASIC20.53■□□□□ 0.88
USP6NLQ92738 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP6NLQ92738 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP6NLQ92738 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP6NLQ92738 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP6NLQ92738 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms