Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 AL031432.2-201ENST00000566714 459 ntBASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 AL928711.1-201ENST00000570165 459 ntBASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 AC002472.2-201ENST00000442739 958 ntBASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 AC108073.2-201ENST00000464002 357 ntBASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 AC068472.1-201ENST00000474589 881 ntBASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 AC007375.3-201ENST00000600936 2314 ntBASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 TEX21P-204ENST00000641479 1693 ntBASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 Z98044.1-201ENST00000632503 1764 ntBASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 AP000344.2-201ENST00000512987 629 ntBASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC168Q8NDH2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 PDPK2P-202ENST00000562415 1191 ntBASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 AC009154.2-201ENST00000621177 724 ntBASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC168Q8NDH2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 AC073621.1-201ENST00000392730 636 ntBASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms