Protein–RNA interactions for Protein: Q8NCQ3

LINC00301, Putative uncharacterized protein encoded by LINC00301, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00301Q8NCQ3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LINC00301Q8NCQ3 AC024243.1-201ENST00000609234 778 ntBASIC20.73■□□□□ 0.91
LINC00301Q8NCQ3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LINC00301Q8NCQ3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.73■□□□□ 0.91
LINC00301Q8NCQ3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00301Q8NCQ3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00301Q8NCQ3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00301Q8NCQ3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00301Q8NCQ3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00301Q8NCQ3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00301Q8NCQ3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00301Q8NCQ3 AC132938.6-201ENST00000623828 1655 ntBASIC20.73■□□□□ 0.91
LINC00301Q8NCQ3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00301Q8NCQ3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00301Q8NCQ3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00301Q8NCQ3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 ECEL1P2-202ENST00000465689 757 ntBASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
LINC00301Q8NCQ3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00301Q8NCQ3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
LINC00301Q8NCQ3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
LINC00301Q8NCQ3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 DUTP2-201ENST00000519164 463 ntBASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.7■□□□□ 0.9
LINC00301Q8NCQ3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms