Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB42Q8N4Z0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB42Q8N4Z0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.74■□□□□ 0.43
RAB42Q8N4Z0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB42Q8N4Z0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB42Q8N4Z0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB42Q8N4Z0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB42Q8N4Z0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB42Q8N4Z0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB42Q8N4Z0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB42Q8N4Z0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB42Q8N4Z0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB42Q8N4Z0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 HLA-F-220ENST00000434407 884 ntBASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB42Q8N4Z0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 KRT89P-201ENST00000620027 1478 ntBASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 AC010331.1-201ENST00000611423 582 ntBASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB42Q8N4Z0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RAB42Q8N4Z0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB42Q8N4Z0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RAB42Q8N4Z0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB42Q8N4Z0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RAB42Q8N4Z0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB42Q8N4Z0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB42Q8N4Z0 AC092597.1-201ENST00000487352 616 ntBASIC17.71■□□□□ 0.43
RAB42Q8N4Z0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB42Q8N4Z0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.71■□□□□ 0.43
RAB42Q8N4Z0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.71■□□□□ 0.43
RAB42Q8N4Z0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RAB42Q8N4Z0 AC079602.3-201ENST00000623931 403 ntBASIC17.71■□□□□ 0.43
RAB42Q8N4Z0 AL121956.5-201ENST00000625261 221 ntBASIC17.71■□□□□ 0.43
RAB42Q8N4Z0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB42Q8N4Z0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB42Q8N4Z0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB42Q8N4Z0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB42Q8N4Z0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms