Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 GPR32P1-201ENST00000601788 811 ntBASIC16.92■□□□□ 0.3
BEST3Q8N1M1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 IGHGP-201ENST00000390555 1178 ntBASIC16.91■□□□□ 0.3
BEST3Q8N1M1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST3Q8N1M1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 LINC00265-3P-201ENST00000447588 903 ntBASIC16.9■□□□□ 0.3
BEST3Q8N1M1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 TPSP2-201ENST00000561760 610 ntBASIC16.9■□□□□ 0.3
BEST3Q8N1M1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 AC099343.3-201ENST00000605834 2503 ntBASIC16.9■□□□□ 0.3
BEST3Q8N1M1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.9■□□□□ 0.3
BEST3Q8N1M1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.89■□□□□ 0.3
BEST3Q8N1M1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
BEST3Q8N1M1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.89■□□□□ 0.3
BEST3Q8N1M1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
BEST3Q8N1M1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BEST3Q8N1M1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BEST3Q8N1M1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST3Q8N1M1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms