Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 AC093458.2-201ENST00000623150 629 ntBASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFWD3Q6PCD5 NOC2LP1-202ENST00000452600 2235 ntBASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 AC090164.3-201ENST00000610780 2143 ntBASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 MIR662-201ENST00000384847 95 ntBASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RFWD3Q6PCD5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 WIZP1-201ENST00000531444 2299 ntBASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 AC009065.1-201ENST00000564055 1225 ntBASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 RNF126P1-202ENST00000569893 925 ntBASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFWD3Q6PCD5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 AC011498.5-201ENST00000592027 486 ntBASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFWD3Q6PCD5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 AL354751.1-201ENST00000412768 1863 ntBASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.95■□□□□ 0.62
RFWD3Q6PCD5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms