Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.66■□□□□ 0.1
AP3S2P59780 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.66■□□□□ 0.1
AP3S2P59780 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.66■□□□□ 0.1
AP3S2P59780 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
AP3S2P59780 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.66■□□□□ 0.1
AP3S2P59780 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.66■□□□□ 0.1
AP3S2P59780 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 KRT18P55-202ENST00000578578 1546 ntBASIC15.66■□□□□ 0.1
AP3S2P59780 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.66■□□□□ 0.1
AP3S2P59780 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
AP3S2P59780 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
AP3S2P59780 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
AP3S2P59780 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
AP3S2P59780 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.66■□□□□ 0.1
AP3S2P59780 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
AP3S2P59780 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
AP3S2P59780 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
AP3S2P59780 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.65■□□□□ 0.1
AP3S2P59780 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.65■□□□□ 0.1
AP3S2P59780 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
AP3S2P59780 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
AP3S2P59780 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.65■□□□□ 0.1
AP3S2P59780 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.65■□□□□ 0.1
AP3S2P59780 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.65■□□□□ 0.1
AP3S2P59780 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.65■□□□□ 0.1
AP3S2P59780 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.65■□□□□ 0.1
AP3S2P59780 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.65■□□□□ 0.1
AP3S2P59780 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 AL139246.5-201ENST00000606645 996 ntBASIC15.65■□□□□ 0.1
AP3S2P59780 AC006557.6-201ENST00000623071 864 ntBASIC15.65■□□□□ 0.1
AP3S2P59780 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.65■□□□□ 0.1
AP3S2P59780 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.65■□□□□ 0.1
AP3S2P59780 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.65■□□□□ 0.1
AP3S2P59780 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 KRT8P3-201ENST00000519669 1449 ntBASIC15.65■□□□□ 0.1
AP3S2P59780 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.65■□□□□ 0.1
AP3S2P59780 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.65■□□□□ 0.1
AP3S2P59780 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.65■□□□□ 0.1
AP3S2P59780 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
AP3S2P59780 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.65■□□□□ 0.1
AP3S2P59780 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.65■□□□□ 0.1
AP3S2P59780 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
AP3S2P59780 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
AP3S2P59780 AL139384.1-201ENST00000612143 3047 ntBASIC15.65■□□□□ 0.1
AP3S2P59780 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AP3S2P59780 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.1
AP3S2P59780 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.1
AP3S2P59780 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.64■□□□□ 0.09
AP3S2P59780 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S2P59780 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S2P59780 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
AP3S2P59780 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S2P59780 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
AP3S2P59780 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
AP3S2P59780 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S2P59780 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S2P59780 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S2P59780 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S2P59780 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S2P59780 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
AP3S2P59780 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.64■□□□□ 0.09
AP3S2P59780 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.64■□□□□ 0.09
AP3S2P59780 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.64■□□□□ 0.09
AP3S2P59780 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.64■□□□□ 0.09
AP3S2P59780 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms