Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.25■□□□□ 0.35
WNT3P56703 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
WNT3P56703 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
WNT3P56703 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
WNT3P56703 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.24■□□□□ 0.35
WNT3P56703 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 TSPY14P-201ENST00000303979 915 ntBASIC17.24■□□□□ 0.35
WNT3P56703 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
WNT3P56703 KRT18P35-201ENST00000510488 1269 ntBASIC17.24■□□□□ 0.35
WNT3P56703 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.24■□□□□ 0.35
WNT3P56703 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.24■□□□□ 0.35
WNT3P56703 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.24■□□□□ 0.35
WNT3P56703 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.24■□□□□ 0.35
WNT3P56703 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.24■□□□□ 0.35
WNT3P56703 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
WNT3P56703 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.24■□□□□ 0.35
WNT3P56703 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
WNT3P56703 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3P56703 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.23■□□□□ 0.35
WNT3P56703 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3P56703 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3P56703 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3P56703 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3P56703 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
WNT3P56703 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.23■□□□□ 0.35
WNT3P56703 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.23■□□□□ 0.35
WNT3P56703 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.23■□□□□ 0.35
WNT3P56703 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
WNT3P56703 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3P56703 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.23■□□□□ 0.35
WNT3P56703 AL049597.2-201ENST00000565575 961 ntBASIC17.23■□□□□ 0.35
WNT3P56703 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.23■□□□□ 0.35
WNT3P56703 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
WNT3P56703 AC010653.2-201ENST00000623505 997 ntBASIC17.23■□□□□ 0.35
WNT3P56703 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.23■□□□□ 0.35
WNT3P56703 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3P56703 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3P56703 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
WNT3P56703 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3P56703 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
WNT3P56703 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3P56703 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3P56703 AC073508.3-201ENST00000619697 1419 ntBASIC17.22■□□□□ 0.35
WNT3P56703 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.22■□□□□ 0.35
WNT3P56703 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
WNT3P56703 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
WNT3P56703 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3P56703 KRT18P55-202ENST00000578578 1546 ntBASIC17.22■□□□□ 0.35
WNT3P56703 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3P56703 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3P56703 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3P56703 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
WNT3P56703 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3P56703 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.22■□□□□ 0.35
WNT3P56703 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.22■□□□□ 0.35
WNT3P56703 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.22■□□□□ 0.35
WNT3P56703 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3P56703 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.22■□□□□ 0.35
WNT3P56703 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.22■□□□□ 0.35
WNT3P56703 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.22■□□□□ 0.35
WNT3P56703 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.22■□□□□ 0.35
WNT3P56703 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.22■□□□□ 0.35
WNT3P56703 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3P56703 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.22■□□□□ 0.35
WNT3P56703 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3P56703 AIRN-201ENST00000601203 4374 ntBASIC17.22■□□□□ 0.35
WNT3P56703 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3P56703 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.22■□□□□ 0.35
WNT3P56703 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
WNT3P56703 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.21■□□□□ 0.35
WNT3P56703 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.21■□□□□ 0.35
WNT3P56703 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.21■□□□□ 0.35
WNT3P56703 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3P56703 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
WNT3P56703 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3P56703 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3P56703 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
WNT3P56703 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms