Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.1■□□□□ 0.33
SMSP52788 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMSP52788 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMSP52788 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMSP52788 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
SMSP52788 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.1■□□□□ 0.33
SMSP52788 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SMSP52788 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMSP52788 HEIH-201ENST00000623091 1652 ntBASIC17.1■□□□□ 0.33
SMSP52788 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMSP52788 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMSP52788 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMSP52788 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SMSP52788 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMSP52788 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.09■□□□□ 0.33
SMSP52788 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMSP52788 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.09■□□□□ 0.33
SMSP52788 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.09■□□□□ 0.33
SMSP52788 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMSP52788 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMSP52788 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMSP52788 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMSP52788 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.09■□□□□ 0.33
SMSP52788 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.09■□□□□ 0.33
SMSP52788 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.09■□□□□ 0.33
SMSP52788 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.09■□□□□ 0.33
SMSP52788 AC008622.2-201ENST00000617006 1229 ntBASIC17.09■□□□□ 0.33
SMSP52788 AL023973.1-201ENST00000624619 620 ntBASIC17.09■□□□□ 0.33
SMSP52788 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.09■□□□□ 0.33
SMSP52788 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SMSP52788 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMSP52788 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.09■□□□□ 0.33
SMSP52788 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMSP52788 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMSP52788 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.09■□□□□ 0.33
SMSP52788 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMSP52788 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMSP52788 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMSP52788 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.09■□□□□ 0.33
SMSP52788 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SMSP52788 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.09■□□□□ 0.33
SMSP52788 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMSP52788 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMSP52788 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMSP52788 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMSP52788 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMSP52788 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SMSP52788 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMSP52788 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.08■□□□□ 0.33
SMSP52788 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMSP52788 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.08■□□□□ 0.33
SMSP52788 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMSP52788 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.08■□□□□ 0.33
SMSP52788 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SMSP52788 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMSP52788 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
SMSP52788 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMSP52788 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SMSP52788 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMSP52788 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMSP52788 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.08■□□□□ 0.32
SMSP52788 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SMSP52788 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMSP52788 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMSP52788 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.08■□□□□ 0.32
SMSP52788 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.08■□□□□ 0.32
SMSP52788 HCG4P8-203ENST00000443049 980 ntBASIC17.08■□□□□ 0.32
SMSP52788 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMSP52788 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.08■□□□□ 0.32
SMSP52788 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.08■□□□□ 0.32
SMSP52788 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.08■□□□□ 0.32
SMSP52788 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMSP52788 AC069148.1-201ENST00000608741 768 ntBASIC17.08■□□□□ 0.32
SMSP52788 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SMSP52788 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.08■□□□□ 0.32
SMSP52788 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMSP52788 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.08■□□□□ 0.32
SMSP52788 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.07■□□□□ 0.32
SMSP52788 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMSP52788 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMSP52788 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMSP52788 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMSP52788 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMSP52788 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMSP52788 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMSP52788 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMSP52788 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SMSP52788 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMSP52788 AL450487.1-201ENST00000426799 995 ntBASIC17.07■□□□□ 0.32
SMSP52788 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.07■□□□□ 0.32
SMSP52788 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.07■□□□□ 0.32
SMSP52788 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.07■□□□□ 0.32
SMSP52788 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMSP52788 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMSP52788 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.07■□□□□ 0.32
SMSP52788 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.07■□□□□ 0.32
SMSP52788 AL121894.2-201ENST00000602977 491 ntBASIC17.07■□□□□ 0.32
SMSP52788 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.07■□□□□ 0.32
SMSP52788 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.07■□□□□ 0.32
SMSP52788 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms