Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF140P52738 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ZNF140P52738 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF140P52738 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.13■□□□□ 0.49
ZNF140P52738 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ZNF140P52738 SPDYE13P-201ENST00000445314 798 ntBASIC18.13■□□□□ 0.49
ZNF140P52738 FAM210CP-201ENST00000445714 574 ntBASIC18.13■□□□□ 0.49
ZNF140P52738 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.13■□□□□ 0.49
ZNF140P52738 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.13■□□□□ 0.49
ZNF140P52738 AC083849.1-201ENST00000615227 514 ntBASIC18.13■□□□□ 0.49
ZNF140P52738 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.13■□□□□ 0.49
ZNF140P52738 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF140P52738 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.13■□□□□ 0.49
ZNF140P52738 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF140P52738 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ZNF140P52738 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
ZNF140P52738 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.13■□□□□ 0.49
ZNF140P52738 NOC2LP2-201ENST00000407594 1944 ntBASIC18.13■□□□□ 0.49
ZNF140P52738 AC008764.6-201ENST00000595909 2069 ntBASIC18.13■□□□□ 0.49
ZNF140P52738 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ZNF140P52738 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF140P52738 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF140P52738 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF140P52738 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF140P52738 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF140P52738 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.12■□□□□ 0.49
ZNF140P52738 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 MIR662-201ENST00000384847 95 ntBASIC18.12■□□□□ 0.49
ZNF140P52738 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.12■□□□□ 0.49
ZNF140P52738 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.12■□□□□ 0.49
ZNF140P52738 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.12■□□□□ 0.49
ZNF140P52738 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF140P52738 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 LINC01311-201ENST00000565162 1445 ntBASIC18.12■□□□□ 0.49
ZNF140P52738 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.12■□□□□ 0.49
ZNF140P52738 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF140P52738 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF140P52738 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ZNF140P52738 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF140P52738 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ZNF140P52738 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF140P52738 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF140P52738 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF140P52738 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ZNF140P52738 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF140P52738 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ZNF140P52738 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF140P52738 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF140P52738 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF140P52738 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF140P52738 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF140P52738 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.11■□□□□ 0.49
ZNF140P52738 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF140P52738 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.11■□□□□ 0.49
ZNF140P52738 KRT18P48-201ENST00000434763 852 ntBASIC18.11■□□□□ 0.49
ZNF140P52738 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.11■□□□□ 0.49
ZNF140P52738 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.11■□□□□ 0.49
ZNF140P52738 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.11■□□□□ 0.49
ZNF140P52738 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.11■□□□□ 0.49
ZNF140P52738 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.11■□□□□ 0.49
ZNF140P52738 LINC01238-205ENST00000567549 1107 ntBASIC18.11■□□□□ 0.49
ZNF140P52738 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.11■□□□□ 0.49
ZNF140P52738 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
ZNF140P52738 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF140P52738 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.11■□□□□ 0.49
ZNF140P52738 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ZNF140P52738 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF140P52738 LINC00602-201ENST00000629776 2065 ntBASIC18.11■□□□□ 0.49
ZNF140P52738 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF140P52738 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ZNF140P52738 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ZNF140P52738 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ZNF140P52738 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF140P52738 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF140P52738 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ZNF140P52738 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF140P52738 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF140P52738 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ZNF140P52738 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF140P52738 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms