Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX2P48431 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.07■□□□□ 0.16
SOX2P48431 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOX2P48431 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SOX2P48431 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX2P48431 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX2P48431 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SOX2P48431 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX2P48431 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX2P48431 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX2P48431 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX2P48431 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX2P48431 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX2P48431 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SOX2P48431 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOX2P48431 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX2P48431 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SOX2P48431 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.06■□□□□ 0.16
SOX2P48431 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX2P48431 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX2P48431 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX2P48431 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX2P48431 HLA-L-209ENST00000420110 1011 ntBASIC16.06■□□□□ 0.16
SOX2P48431 AC133681.1-201ENST00000465482 601 ntBASIC16.06■□□□□ 0.16
SOX2P48431 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.06■□□□□ 0.16
SOX2P48431 KRT18P41-201ENST00000518924 1277 ntBASIC16.06■□□□□ 0.16
SOX2P48431 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.06■□□□□ 0.16
SOX2P48431 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SOX2P48431 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.06■□□□□ 0.16
SOX2P48431 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX2P48431 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.06■□□□□ 0.16
SOX2P48431 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX2P48431 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOX2P48431 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.06■□□□□ 0.16
SOX2P48431 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SOX2P48431 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
SOX2P48431 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.06■□□□□ 0.16
SOX2P48431 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SOX2P48431 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX2P48431 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX2P48431 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX2P48431 PHGDH-209ENST00000641074 1780 ntBASIC16.05■□□□□ 0.16
SOX2P48431 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX2P48431 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SOX2P48431 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX2P48431 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX2P48431 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX2P48431 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SOX2P48431 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.05■□□□□ 0.16
SOX2P48431 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SOX2P48431 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX2P48431 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX2P48431 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.05■□□□□ 0.16
SOX2P48431 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SOX2P48431 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX2P48431 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.05■□□□□ 0.16
SOX2P48431 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
SOX2P48431 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX2P48431 ESRRAP1-201ENST00000400596 1257 ntBASIC16.05■□□□□ 0.16
SOX2P48431 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SOX2P48431 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX2P48431 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
SOX2P48431 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
SOX2P48431 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.05■□□□□ 0.16
SOX2P48431 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX2P48431 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.05■□□□□ 0.16
SOX2P48431 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX2P48431 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SOX2P48431 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SOX2P48431 AC092666.2-201ENST00000613287 246 ntBASIC16.05■□□□□ 0.16
SOX2P48431 AC008622.2-201ENST00000617006 1229 ntBASIC16.05■□□□□ 0.16
SOX2P48431 AL031985.4-201ENST00000642138 673 ntBASIC16.05■□□□□ 0.16
SOX2P48431 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX2P48431 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOX2P48431 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.05■□□□□ 0.16
SOX2P48431 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX2P48431 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX2P48431 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX2P48431 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.05■□□□□ 0.16
SOX2P48431 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOX2P48431 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
SOX2P48431 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX2P48431 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SOX2P48431 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX2P48431 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SOX2P48431 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.04■□□□□ 0.16
SOX2P48431 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX2P48431 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX2P48431 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX2P48431 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX2P48431 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX2P48431 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.04■□□□□ 0.16
SOX2P48431 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX2P48431 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
SOX2P48431 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX2P48431 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.04■□□□□ 0.16
SOX2P48431 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
SOX2P48431 RN7SL471P-201ENST00000580476 299 ntBASIC16.04■□□□□ 0.16
SOX2P48431 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.04■□□□□ 0.16
SOX2P48431 AL353708.3-201ENST00000610272 989 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms