Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MIR3180-5-201ENST00000583743 153 ntBASIC19.4■□□□□ 0.7
SSR1P43307 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.4■□□□□ 0.7
SSR1P43307 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSR1P43307 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSR1P43307 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.4■□□□□ 0.7
SSR1P43307 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SSR1P43307 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSR1P43307 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.4■□□□□ 0.7
SSR1P43307 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SSR1P43307 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SSR1P43307 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.4■□□□□ 0.7
SSR1P43307 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSR1P43307 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SSR1P43307 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.39■□□□□ 0.7
SSR1P43307 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
SSR1P43307 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SSR1P43307 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
SSR1P43307 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.39■□□□□ 0.69
SSR1P43307 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSR1P43307 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SSR1P43307 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
SSR1P43307 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SSR1P43307 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSR1P43307 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSR1P43307 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.39■□□□□ 0.69
SSR1P43307 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.39■□□□□ 0.69
SSR1P43307 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.39■□□□□ 0.69
SSR1P43307 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSR1P43307 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSR1P43307 MIR4674-201ENST00000582457 87 ntBASIC19.39■□□□□ 0.69
SSR1P43307 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSR1P43307 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSR1P43307 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.39■□□□□ 0.69
SSR1P43307 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.39■□□□□ 0.69
SSR1P43307 AL162741.1-201ENST00000565563 1558 ntBASIC19.39■□□□□ 0.69
SSR1P43307 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSR1P43307 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SSR1P43307 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.38■□□□□ 0.69
SSR1P43307 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR1P43307 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR1P43307 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR1P43307 KRT17P2-201ENST00000300992 1314 ntBASIC19.38■□□□□ 0.69
SSR1P43307 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR1P43307 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSR1P43307 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SSR1P43307 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.38■□□□□ 0.69
SSR1P43307 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSR1P43307 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSR1P43307 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SSR1P43307 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SSR1P43307 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.38■□□□□ 0.69
SSR1P43307 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR1P43307 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.38■□□□□ 0.69
SSR1P43307 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SSR1P43307 AP003041.3-201ENST00000527151 707 ntBASIC19.38■□□□□ 0.69
SSR1P43307 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
SSR1P43307 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SSR1P43307 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SSR1P43307 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSR1P43307 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.38■□□□□ 0.69
SSR1P43307 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.38■□□□□ 0.69
SSR1P43307 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SSR1P43307 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.38■□□□□ 0.69
SSR1P43307 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.38■□□□□ 0.69
SSR1P43307 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SSR1P43307 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR1P43307 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR1P43307 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SSR1P43307 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSR1P43307 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSR1P43307 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSR1P43307 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSR1P43307 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSR1P43307 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSR1P43307 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.37■□□□□ 0.69
SSR1P43307 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SSR1P43307 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSR1P43307 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSR1P43307 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.37■□□□□ 0.69
SSR1P43307 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSR1P43307 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSR1P43307 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.37■□□□□ 0.69
SSR1P43307 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.37■□□□□ 0.69
SSR1P43307 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.37■□□□□ 0.69
SSR1P43307 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.37■□□□□ 0.69
SSR1P43307 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SSR1P43307 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.37■□□□□ 0.69
SSR1P43307 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSR1P43307 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.37■□□□□ 0.69
SSR1P43307 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSR1P43307 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SSR1P43307 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.36■□□□□ 0.69
SSR1P43307 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
SSR1P43307 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR1P43307 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.36■□□□□ 0.69
SSR1P43307 ESPNP-201ENST00000270691 2015 ntBASIC19.36■□□□□ 0.69
SSR1P43307 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.36■□□□□ 0.69
SSR1P43307 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR1P43307 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR1P43307 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms