Protein–RNA interactions for Protein: P42766

RPL35, 60S ribosomal protein L35, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P42766 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.73□□□□□ -0.05
RPL35P42766 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.73□□□□□ -0.05
RPL35P42766 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL35P42766 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.73□□□□□ -0.05
RPL35P42766 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RPL35P42766 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RPL35P42766 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.73□□□□□ -0.05
RPL35P42766 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL35P42766 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
RPL35P42766 ZNF815P-204ENST00000434898 1737 ntBASIC14.72□□□□□ -0.05
RPL35P42766 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RPL35P42766 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
RPL35P42766 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.72□□□□□ -0.05
RPL35P42766 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.72□□□□□ -0.05
RPL35P42766 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.72□□□□□ -0.05
RPL35P42766 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
RPL35P42766 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.72□□□□□ -0.05
RPL35P42766 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RPL35P42766 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.72□□□□□ -0.05
RPL35P42766 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.72□□□□□ -0.05
RPL35P42766 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.72□□□□□ -0.05
RPL35P42766 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.72□□□□□ -0.05
RPL35P42766 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RPL35P42766 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.72□□□□□ -0.05
RPL35P42766 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RPL35P42766 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.72□□□□□ -0.05
RPL35P42766 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPL35P42766 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.71□□□□□ -0.05
RPL35P42766 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RPL35P42766 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPL35P42766 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RPL35P42766 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPL35P42766 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.71□□□□□ -0.05
RPL35P42766 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.71□□□□□ -0.05
RPL35P42766 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RPL35P42766 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.71□□□□□ -0.05
RPL35P42766 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RPL35P42766 EDA-201ENST00000338901 1233 ntBASIC14.71□□□□□ -0.05
RPL35P42766 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RPL35P42766 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPL35P42766 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.71□□□□□ -0.05
RPL35P42766 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.71□□□□□ -0.05
RPL35P42766 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC14.71□□□□□ -0.05
RPL35P42766 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RPL35P42766 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RPL35P42766 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RPL35P42766 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.05
RPL35P42766 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.71□□□□□ -0.05
RPL35P42766 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPL35P42766 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPL35P42766 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
RPL35P42766 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPL35P42766 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RPL35P42766 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
RPL35P42766 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
RPL35P42766 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
RPL35P42766 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RPL35P42766 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
RPL35P42766 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
RPL35P42766 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.71□□□□□ -0.06
RPL35P42766 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.71□□□□□ -0.06
RPL35P42766 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RPL35P42766 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.7□□□□□ -0.06
RPL35P42766 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPL35P42766 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RPL35P42766 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RPL35P42766 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPL35P42766 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPL35P42766 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPL35P42766 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPL35P42766 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
RPL35P42766 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPL35P42766 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RPL35P42766 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RPL35P42766 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPL35P42766 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPL35P42766 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RPL35P42766 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.7□□□□□ -0.06
RPL35P42766 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RPL35P42766 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RPL35P42766 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms