Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SNCAP37840 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SNCAP37840 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SNCAP37840 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SNCAP37840 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SNCAP37840 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.02■□□□□ -0
SNCAP37840 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SNCAP37840 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SNCAP37840 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SNCAP37840 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.02■□□□□ -0
SNCAP37840 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.02■□□□□ -0
SNCAP37840 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SNCAP37840 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
SNCAP37840 AL118508.1-201ENST00000613502 2345 ntBASIC15.02■□□□□ -0
SNCAP37840 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.02■□□□□ -0
SNCAP37840 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.02■□□□□ -0
SNCAP37840 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SNCAP37840 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SNCAP37840 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.02■□□□□ -0
SNCAP37840 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.02■□□□□ -0
SNCAP37840 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SNCAP37840 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.02■□□□□ -0
SNCAP37840 AC104771.1-201ENST00000603335 964 ntBASIC15.02■□□□□ -0
SNCAP37840 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.02□□□□□ -0.01
SNCAP37840 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNCAP37840 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.02□□□□□ -0.01
SNCAP37840 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNCAP37840 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNCAP37840 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.02□□□□□ -0.01
SNCAP37840 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.02□□□□□ -0.01
SNCAP37840 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SNCAP37840 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SNCAP37840 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNCAP37840 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNCAP37840 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNCAP37840 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNCAP37840 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNCAP37840 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
SNCAP37840 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNCAP37840 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.02□□□□□ -0.01
SNCAP37840 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
SNCAP37840 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNCAP37840 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.01□□□□□ -0.01
SNCAP37840 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.01□□□□□ -0.01
SNCAP37840 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.01□□□□□ -0.01
SNCAP37840 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.01□□□□□ -0.01
SNCAP37840 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.01□□□□□ -0.01
SNCAP37840 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.01□□□□□ -0.01
SNCAP37840 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.01□□□□□ -0.01
SNCAP37840 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SNCAP37840 AC011676.5-201ENST00000624864 2660 ntBASIC15.01□□□□□ -0.01
SNCAP37840 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SNCAP37840 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SNCAP37840 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
SNCAP37840 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SNCAP37840 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.01□□□□□ -0.01
SNCAP37840 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.01□□□□□ -0.01
SNCAP37840 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.01□□□□□ -0.01
SNCAP37840 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.01□□□□□ -0.01
SNCAP37840 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SNCAP37840 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SNCAP37840 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15□□□□□ -0.01
SNCAP37840 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SNCAP37840 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms