Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.89■□□□□ 0.29
PEPDP12955 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.89■□□□□ 0.29
PEPDP12955 YBX1P2-201ENST00000489612 999 ntBASIC16.89■□□□□ 0.29
PEPDP12955 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.89■□□□□ 0.29
PEPDP12955 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PEPDP12955 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PEPDP12955 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PEPDP12955 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.89■□□□□ 0.29
PEPDP12955 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PEPDP12955 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.89■□□□□ 0.29
PEPDP12955 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PEPDP12955 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PEPDP12955 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PEPDP12955 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PEPDP12955 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PEPDP12955 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PEPDP12955 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PEPDP12955 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PEPDP12955 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PEPDP12955 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.89■□□□□ 0.29
PEPDP12955 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.89■□□□□ 0.29
PEPDP12955 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PEPDP12955 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PEPDP12955 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEPDP12955 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PEPDP12955 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEPDP12955 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PEPDP12955 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEPDP12955 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEPDP12955 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PEPDP12955 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEPDP12955 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEPDP12955 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEPDP12955 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEPDP12955 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.88■□□□□ 0.29
PEPDP12955 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.88■□□□□ 0.29
PEPDP12955 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.88■□□□□ 0.29
PEPDP12955 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.88■□□□□ 0.29
PEPDP12955 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.88■□□□□ 0.29
PEPDP12955 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.88■□□□□ 0.29
PEPDP12955 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.88■□□□□ 0.29
PEPDP12955 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PEPDP12955 MYC-208ENST00000641036 567 ntBASIC16.88■□□□□ 0.29
PEPDP12955 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.88■□□□□ 0.29
PEPDP12955 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEPDP12955 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PEPDP12955 AL357033.4-201ENST00000617703 1807 ntBASIC16.88■□□□□ 0.29
PEPDP12955 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEPDP12955 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEPDP12955 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.88■□□□□ 0.29
PEPDP12955 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEPDP12955 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.88■□□□□ 0.29
PEPDP12955 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PEPDP12955 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PEPDP12955 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.88■□□□□ 0.29
PEPDP12955 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.88■□□□□ 0.29
PEPDP12955 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEPDP12955 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.87■□□□□ 0.29
PEPDP12955 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEPDP12955 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PEPDP12955 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PEPDP12955 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEPDP12955 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.87■□□□□ 0.29
PEPDP12955 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PEPDP12955 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.87■□□□□ 0.29
PEPDP12955 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PEPDP12955 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEPDP12955 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.87■□□□□ 0.29
PEPDP12955 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEPDP12955 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEPDP12955 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEPDP12955 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PEPDP12955 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEPDP12955 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.87■□□□□ 0.29
PEPDP12955 TSPY5P-201ENST00000426936 936 ntBASIC16.87■□□□□ 0.29
PEPDP12955 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.87■□□□□ 0.29
PEPDP12955 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.87■□□□□ 0.29
PEPDP12955 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.87■□□□□ 0.29
PEPDP12955 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PEPDP12955 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PEPDP12955 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.87■□□□□ 0.29
PEPDP12955 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEPDP12955 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEPDP12955 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEPDP12955 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEPDP12955 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEPDP12955 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.87■□□□□ 0.29
PEPDP12955 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.87■□□□□ 0.29
PEPDP12955 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PEPDP12955 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PEPDP12955 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PEPDP12955 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PEPDP12955 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.86■□□□□ 0.29
PEPDP12955 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PEPDP12955 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PEPDP12955 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
PEPDP12955 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.86■□□□□ 0.29
PEPDP12955 AL133373.2-201ENST00000623187 2828 ntBASIC16.86■□□□□ 0.29
PEPDP12955 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.86■□□□□ 0.29
PEPDP12955 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms