Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCNAP12004 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCNAP12004 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCNAP12004 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
PCNAP12004 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
PCNAP12004 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCNAP12004 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PCNAP12004 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCNAP12004 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCNAP12004 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.76■□□□□ 0.43
PCNAP12004 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCNAP12004 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
PCNAP12004 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCNAP12004 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PCNAP12004 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCNAP12004 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCNAP12004 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCNAP12004 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCNAP12004 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCNAP12004 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCNAP12004 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCNAP12004 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.76■□□□□ 0.43
PCNAP12004 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.76■□□□□ 0.43
PCNAP12004 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCNAP12004 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.76■□□□□ 0.43
PCNAP12004 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.76■□□□□ 0.43
PCNAP12004 WWOX-216ENST00000569818 525 ntBASIC17.76■□□□□ 0.43
PCNAP12004 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCNAP12004 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCNAP12004 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCNAP12004 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCNAP12004 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCNAP12004 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
PCNAP12004 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCNAP12004 LINC01568-207ENST00000641790 1380 ntBASIC17.76■□□□□ 0.43
PCNAP12004 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCNAP12004 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCNAP12004 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.76■□□□□ 0.43
PCNAP12004 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.75■□□□□ 0.43
PCNAP12004 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PCNAP12004 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PCNAP12004 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PCNAP12004 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.75■□□□□ 0.43
PCNAP12004 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 AC012313.1-201ENST00000593393 3059 ntBASIC17.75■□□□□ 0.43
PCNAP12004 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.75■□□□□ 0.43
PCNAP12004 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.75■□□□□ 0.43
PCNAP12004 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.75■□□□□ 0.43
PCNAP12004 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.75■□□□□ 0.43
PCNAP12004 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
PCNAP12004 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.75■□□□□ 0.43
PCNAP12004 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.75■□□□□ 0.43
PCNAP12004 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.75■□□□□ 0.43
PCNAP12004 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.75■□□□□ 0.43
PCNAP12004 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.75■□□□□ 0.43
PCNAP12004 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.75■□□□□ 0.43
PCNAP12004 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.75■□□□□ 0.43
PCNAP12004 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.75■□□□□ 0.43
PCNAP12004 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNAP12004 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
PCNAP12004 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.74■□□□□ 0.43
PCNAP12004 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCNAP12004 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCNAP12004 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCNAP12004 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
PCNAP12004 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCNAP12004 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCNAP12004 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCNAP12004 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCNAP12004 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.74■□□□□ 0.43
PCNAP12004 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCNAP12004 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCNAP12004 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCNAP12004 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
PCNAP12004 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCNAP12004 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCNAP12004 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCNAP12004 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.74■□□□□ 0.43
PCNAP12004 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.74■□□□□ 0.43
PCNAP12004 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
PCNAP12004 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.74■□□□□ 0.43
PCNAP12004 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms