Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.15■□□□□ 0.02
CTSDP07339 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.15■□□□□ 0.02
CTSDP07339 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.15■□□□□ 0.02
CTSDP07339 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.15■□□□□ 0.02
CTSDP07339 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.15■□□□□ 0.02
CTSDP07339 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.15■□□□□ 0.02
CTSDP07339 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.15■□□□□ 0.02
CTSDP07339 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.15■□□□□ 0.02
CTSDP07339 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.15■□□□□ 0.02
CTSDP07339 CKBP1-201ENST00000565489 1086 ntBASIC15.15■□□□□ 0.02
CTSDP07339 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.15■□□□□ 0.02
CTSDP07339 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.15■□□□□ 0.02
CTSDP07339 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.15■□□□□ 0.02
CTSDP07339 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.15■□□□□ 0.02
CTSDP07339 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CTSDP07339 KRT8P50-201ENST00000562022 1438 ntBASIC15.15■□□□□ 0.02
CTSDP07339 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CTSDP07339 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.14■□□□□ 0.01
CTSDP07339 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.14■□□□□ 0.01
CTSDP07339 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CTSDP07339 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 AC093010.1-201ENST00000473625 1624 ntBASIC15.14■□□□□ 0.01
CTSDP07339 AC034236.2-201ENST00000606662 1610 ntBASIC15.14■□□□□ 0.01
CTSDP07339 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CTSDP07339 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.14■□□□□ 0.01
CTSDP07339 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 AC004951.3-201ENST00000418645 1148 ntBASIC15.14■□□□□ 0.01
CTSDP07339 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.14■□□□□ 0.01
CTSDP07339 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.14■□□□□ 0.01
CTSDP07339 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.14■□□□□ 0.01
CTSDP07339 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CTSDP07339 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.14■□□□□ 0.01
CTSDP07339 MTDHP1-201ENST00000605323 784 ntBASIC15.14■□□□□ 0.01
CTSDP07339 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.14■□□□□ 0.01
CTSDP07339 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.14■□□□□ 0.01
CTSDP07339 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.14■□□□□ 0.01
CTSDP07339 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.14■□□□□ 0.01
CTSDP07339 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CTSDP07339 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CTSDP07339 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CTSDP07339 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CTSDP07339 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CTSDP07339 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CTSDP07339 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CTSDP07339 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CTSDP07339 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.13■□□□□ 0.01
CTSDP07339 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.13■□□□□ 0.01
CTSDP07339 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.13■□□□□ 0.01
CTSDP07339 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms