Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFAP04085 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFAP04085 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFAP04085 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFAP04085 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.03■□□□□ 0.32
PDGFAP04085 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.03■□□□□ 0.32
PDGFAP04085 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.03■□□□□ 0.32
PDGFAP04085 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.03■□□□□ 0.32
PDGFAP04085 AC120114.3-201ENST00000611923 658 ntBASIC17.03■□□□□ 0.32
PDGFAP04085 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.03■□□□□ 0.32
PDGFAP04085 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFAP04085 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFAP04085 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.03■□□□□ 0.32
PDGFAP04085 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.03■□□□□ 0.32
PDGFAP04085 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFAP04085 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFAP04085 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.03■□□□□ 0.32
PDGFAP04085 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.03■□□□□ 0.32
PDGFAP04085 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFAP04085 KRT8P7-201ENST00000533003 1432 ntBASIC17.03■□□□□ 0.32
PDGFAP04085 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.03■□□□□ 0.32
PDGFAP04085 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.03■□□□□ 0.32
PDGFAP04085 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFAP04085 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PDGFAP04085 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFAP04085 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFAP04085 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFAP04085 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PDGFAP04085 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFAP04085 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PDGFAP04085 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PDGFAP04085 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFAP04085 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFAP04085 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFAP04085 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PDGFAP04085 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.02■□□□□ 0.32
PDGFAP04085 TEX21P-204ENST00000641479 1693 ntBASIC17.02■□□□□ 0.32
PDGFAP04085 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.02■□□□□ 0.32
PDGFAP04085 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFAP04085 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFAP04085 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFAP04085 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.02■□□□□ 0.32
PDGFAP04085 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.02■□□□□ 0.32
PDGFAP04085 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.02■□□□□ 0.32
PDGFAP04085 AP005901.3-202ENST00000581653 237 ntBASIC17.02■□□□□ 0.32
PDGFAP04085 AL592071.1-201ENST00000611956 408 ntBASIC17.02■□□□□ 0.32
PDGFAP04085 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFAP04085 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFAP04085 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PDGFAP04085 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDGFAP04085 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PDGFAP04085 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDGFAP04085 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.02■□□□□ 0.31
PDGFAP04085 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDGFAP04085 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDGFAP04085 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.02■□□□□ 0.31
PDGFAP04085 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDGFAP04085 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.01■□□□□ 0.31
PDGFAP04085 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PDGFAP04085 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.01■□□□□ 0.31
PDGFAP04085 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PDGFAP04085 MIR564-202ENST00000385049 94 ntBASIC17.01■□□□□ 0.31
PDGFAP04085 AP000593.1-201ENST00000393668 712 ntBASIC17.01■□□□□ 0.31
PDGFAP04085 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.01■□□□□ 0.31
PDGFAP04085 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.01■□□□□ 0.31
PDGFAP04085 AC091607.1-201ENST00000490318 1060 ntBASIC17.01■□□□□ 0.31
PDGFAP04085 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.01■□□□□ 0.31
PDGFAP04085 Z69720.1-201ENST00000601483 472 ntBASIC17.01■□□□□ 0.31
PDGFAP04085 GPR32P1-201ENST00000601788 811 ntBASIC17.01■□□□□ 0.31
PDGFAP04085 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.01■□□□□ 0.31
PDGFAP04085 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.01■□□□□ 0.31
PDGFAP04085 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFAP04085 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PDGFAP04085 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PDGFAP04085 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PDGFAP04085 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PDGFAP04085 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17■□□□□ 0.31
PDGFAP04085 KATNBL1P6-202ENST00000562413 1466 ntBASIC17■□□□□ 0.31
PDGFAP04085 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17■□□□□ 0.31
PDGFAP04085 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17■□□□□ 0.31
PDGFAP04085 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17■□□□□ 0.31
PDGFAP04085 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms