Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ALDH1A1P00352 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.7■□□□□ 0.9
ALDH1A1P00352 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.7■□□□□ 0.9
ALDH1A1P00352 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
ALDH1A1P00352 SIGLEC16-201ENST00000599858 1437 ntBASIC20.7■□□□□ 0.9
ALDH1A1P00352 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALDH1A1P00352 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.69■□□□□ 0.9
ALDH1A1P00352 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALDH1A1P00352 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALDH1A1P00352 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALDH1A1P00352 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.69■□□□□ 0.9
ALDH1A1P00352 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.69■□□□□ 0.9
ALDH1A1P00352 VN2R19P-201ENST00000442399 1052 ntBASIC20.69■□□□□ 0.9
ALDH1A1P00352 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
ALDH1A1P00352 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.69■□□□□ 0.9
ALDH1A1P00352 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.69■□□□□ 0.9
ALDH1A1P00352 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.69■□□□□ 0.9
ALDH1A1P00352 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALDH1A1P00352 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALDH1A1P00352 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ALDH1A1P00352 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.69■□□□□ 0.9
ALDH1A1P00352 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALDH1A1P00352 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.68■□□□□ 0.9
ALDH1A1P00352 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.68■□□□□ 0.9
ALDH1A1P00352 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALDH1A1P00352 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALDH1A1P00352 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALDH1A1P00352 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.68■□□□□ 0.9
ALDH1A1P00352 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ALDH1A1P00352 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALDH1A1P00352 AL078644.1-201ENST00000609881 752 ntBASIC20.68■□□□□ 0.9
ALDH1A1P00352 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALDH1A1P00352 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALDH1A1P00352 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ALDH1A1P00352 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ALDH1A1P00352 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.68■□□□□ 0.9
ALDH1A1P00352 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALDH1A1P00352 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALDH1A1P00352 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ALDH1A1P00352 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALDH1A1P00352 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALDH1A1P00352 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ALDH1A1P00352 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALDH1A1P00352 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.67■□□□□ 0.9
ALDH1A1P00352 PRSS29P-201ENST00000440800 595 ntBASIC20.67■□□□□ 0.9
ALDH1A1P00352 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.67■□□□□ 0.9
ALDH1A1P00352 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ALDH1A1P00352 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALDH1A1P00352 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ALDH1A1P00352 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.67■□□□□ 0.9
ALDH1A1P00352 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.67■□□□□ 0.9
ALDH1A1P00352 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.67■□□□□ 0.9
ALDH1A1P00352 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALDH1A1P00352 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.67■□□□□ 0.9
ALDH1A1P00352 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALDH1A1P00352 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ALDH1A1P00352 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALDH1A1P00352 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.67■□□□□ 0.9
ALDH1A1P00352 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALDH1A1P00352 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALDH1A1P00352 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ALDH1A1P00352 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALDH1A1P00352 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.66■□□□□ 0.9
ALDH1A1P00352 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALDH1A1P00352 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALDH1A1P00352 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.66■□□□□ 0.9
ALDH1A1P00352 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.66■□□□□ 0.9
ALDH1A1P00352 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.66■□□□□ 0.9
ALDH1A1P00352 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALDH1A1P00352 TSEN15P1-201ENST00000423257 515 ntBASIC20.66■□□□□ 0.9
ALDH1A1P00352 AC007967.3-201ENST00000434308 558 ntBASIC20.66■□□□□ 0.9
ALDH1A1P00352 BCRP1-201ENST00000444246 691 ntBASIC20.66■□□□□ 0.9
ALDH1A1P00352 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.66■□□□□ 0.9
ALDH1A1P00352 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.66■□□□□ 0.9
ALDH1A1P00352 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.66■□□□□ 0.9
ALDH1A1P00352 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.66■□□□□ 0.9
ALDH1A1P00352 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.66■□□□□ 0.9
ALDH1A1P00352 MIR4751-201ENST00000578027 74 ntBASIC20.66■□□□□ 0.9
ALDH1A1P00352 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ALDH1A1P00352 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALDH1A1P00352 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.66■□□□□ 0.9
ALDH1A1P00352 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.66■□□□□ 0.9
ALDH1A1P00352 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALDH1A1P00352 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ALDH1A1P00352 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALDH1A1P00352 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ALDH1A1P00352 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALDH1A1P00352 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALDH1A1P00352 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ALDH1A1P00352 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ALDH1A1P00352 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ALDH1A1P00352 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.65■□□□□ 0.9
ALDH1A1P00352 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.65■□□□□ 0.9
ALDH1A1P00352 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ALDH1A1P00352 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ALDH1A1P00352 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ALDH1A1P00352 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ALDH1A1P00352 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ALDH1A1P00352 AC092474.2-201ENST00000424288 719 ntBASIC20.65■□□□□ 0.9
ALDH1A1P00352 ACTG1P14-201ENST00000446382 1122 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms