Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC27.17■■□□□ 1.94
RAPGEF3O95398 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RAPGEF3O95398 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RAPGEF3O95398 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RAPGEF3O95398 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RAPGEF3O95398 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RAPGEF3O95398 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC27.17■■□□□ 1.94
RAPGEF3O95398 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
RAPGEF3O95398 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC27.16■■□□□ 1.94
RAPGEF3O95398 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RAPGEF3O95398 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
RAPGEF3O95398 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
RAPGEF3O95398 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RAPGEF3O95398 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RAPGEF3O95398 IGLL3P-201ENST00000412472 434 ntBASIC27.16■■□□□ 1.94
RAPGEF3O95398 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RAPGEF3O95398 MIR4745-201ENST00000577608 62 ntBASIC27.16■■□□□ 1.94
RAPGEF3O95398 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC27.16■■□□□ 1.94
RAPGEF3O95398 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RAPGEF3O95398 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RAPGEF3O95398 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
RAPGEF3O95398 AL137060.1-201ENST00000618151 2648 ntBASIC27.16■■□□□ 1.94
RAPGEF3O95398 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
RAPGEF3O95398 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RAPGEF3O95398 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
RAPGEF3O95398 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC27.15■■□□□ 1.94
RAPGEF3O95398 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RAPGEF3O95398 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC27.15■■□□□ 1.94
RAPGEF3O95398 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC27.15■■□□□ 1.94
RAPGEF3O95398 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
RAPGEF3O95398 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RAPGEF3O95398 STOM-202ENST00000347359 870 ntTSL 2 BASIC27.15■■□□□ 1.94
RAPGEF3O95398 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC27.15■■□□□ 1.94
RAPGEF3O95398 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RAPGEF3O95398 CCND1-203ENST00000536559 553 ntTSL 3 BASIC27.15■■□□□ 1.94
RAPGEF3O95398 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RAPGEF3O95398 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC27.15■■□□□ 1.94
RAPGEF3O95398 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC27.15■■□□□ 1.94
RAPGEF3O95398 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC27.15■■□□□ 1.94
RAPGEF3O95398 AC004706.3-202ENST00000621574 984 ntBASIC27.15■■□□□ 1.94
RAPGEF3O95398 AD001527.2-201ENST00000622994 785 ntBASIC27.15■■□□□ 1.94
RAPGEF3O95398 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RAPGEF3O95398 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RAPGEF3O95398 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RAPGEF3O95398 SIGLEC16-201ENST00000599858 1437 ntBASIC27.15■■□□□ 1.94
RAPGEF3O95398 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RAPGEF3O95398 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
RAPGEF3O95398 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
RAPGEF3O95398 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
RAPGEF3O95398 GOLGA6L17P-202ENST00000614358 1398 ntBASIC27.14■■□□□ 1.94
RAPGEF3O95398 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
RAPGEF3O95398 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
RAPGEF3O95398 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
RAPGEF3O95398 SPDYE21P-201ENST00000413323 827 ntBASIC27.14■■□□□ 1.94
RAPGEF3O95398 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
RAPGEF3O95398 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC27.14■■□□□ 1.94
RAPGEF3O95398 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC27.14■■□□□ 1.94
RAPGEF3O95398 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC27.14■■□□□ 1.94
RAPGEF3O95398 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC27.14■■□□□ 1.94
RAPGEF3O95398 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
RAPGEF3O95398 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC27.14■■□□□ 1.94
RAPGEF3O95398 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
RAPGEF3O95398 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
RAPGEF3O95398 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RAPGEF3O95398 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
RAPGEF3O95398 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
RAPGEF3O95398 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC27.13■■□□□ 1.93
RAPGEF3O95398 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC27.13■■□□□ 1.93
RAPGEF3O95398 AP000344.2-201ENST00000512987 629 ntBASIC27.13■■□□□ 1.93
RAPGEF3O95398 COX5A-202ENST00000562233 441 ntTSL 3 BASIC27.13■■□□□ 1.93
RAPGEF3O95398 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC27.13■■□□□ 1.93
RAPGEF3O95398 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC27.13■■□□□ 1.93
RAPGEF3O95398 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC27.13■■□□□ 1.93
RAPGEF3O95398 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC27.13■■□□□ 1.93
RAPGEF3O95398 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC27.13■■□□□ 1.93
RAPGEF3O95398 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC27.13■■□□□ 1.93
RAPGEF3O95398 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RAPGEF3O95398 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC27.13■■□□□ 1.93
RAPGEF3O95398 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RAPGEF3O95398 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC27.13■■□□□ 1.93
RAPGEF3O95398 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RAPGEF3O95398 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RAPGEF3O95398 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RAPGEF3O95398 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RAPGEF3O95398 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
RAPGEF3O95398 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC27.12■■□□□ 1.93
RAPGEF3O95398 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
RAPGEF3O95398 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
RAPGEF3O95398 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC27.12■■□□□ 1.93
RAPGEF3O95398 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RAPGEF3O95398 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC27.12■■□□□ 1.93
RAPGEF3O95398 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC27.12■■□□□ 1.93
RAPGEF3O95398 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RAPGEF3O95398 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC27.12■■□□□ 1.93
RAPGEF3O95398 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RAPGEF3O95398 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC27.12■■□□□ 1.93
RAPGEF3O95398 PDPK2P-202ENST00000562415 1191 ntBASIC27.12■■□□□ 1.93
RAPGEF3O95398 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC27.12■■□□□ 1.93
RAPGEF3O95398 AC004790.2-201ENST00000623588 572 ntBASIC27.12■■□□□ 1.93
RAPGEF3O95398 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms