Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX4O95219 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX4O95219 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX4O95219 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX4O95219 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX4O95219 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX4O95219 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX4O95219 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX4O95219 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SNX4O95219 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX4O95219 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
SNX4O95219 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX4O95219 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
SNX4O95219 RCC2P3-201ENST00000418112 1537 ntBASIC17.13■□□□□ 0.33
SNX4O95219 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.13■□□□□ 0.33
SNX4O95219 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX4O95219 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.13■□□□□ 0.33
SNX4O95219 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.13■□□□□ 0.33
SNX4O95219 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX4O95219 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SNX4O95219 RNF152P1-201ENST00000397754 604 ntBASIC17.13■□□□□ 0.33
SNX4O95219 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX4O95219 AC117947.1-201ENST00000427448 529 ntBASIC17.13■□□□□ 0.33
SNX4O95219 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.13■□□□□ 0.33
SNX4O95219 AC009947.2-201ENST00000444014 672 ntBASIC17.13■□□□□ 0.33
SNX4O95219 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.13■□□□□ 0.33
SNX4O95219 YBX1P2-201ENST00000489612 999 ntBASIC17.13■□□□□ 0.33
SNX4O95219 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.13■□□□□ 0.33
SNX4O95219 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX4O95219 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.13■□□□□ 0.33
SNX4O95219 AC139887.4-201ENST00000607877 719 ntBASIC17.13■□□□□ 0.33
SNX4O95219 AC010331.1-201ENST00000611423 582 ntBASIC17.13■□□□□ 0.33
SNX4O95219 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX4O95219 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX4O95219 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX4O95219 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.13■□□□□ 0.33
SNX4O95219 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX4O95219 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.13■□□□□ 0.33
SNX4O95219 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.13■□□□□ 0.33
SNX4O95219 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SNX4O95219 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.13■□□□□ 0.33
SNX4O95219 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX4O95219 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX4O95219 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
SNX4O95219 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX4O95219 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX4O95219 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SNX4O95219 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SNX4O95219 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SNX4O95219 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SNX4O95219 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.12■□□□□ 0.33
SNX4O95219 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.12■□□□□ 0.33
SNX4O95219 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.12■□□□□ 0.33
SNX4O95219 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX4O95219 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.12■□□□□ 0.33
SNX4O95219 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SNX4O95219 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX4O95219 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
SNX4O95219 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
SNX4O95219 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX4O95219 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX4O95219 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.11■□□□□ 0.33
SNX4O95219 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX4O95219 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX4O95219 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX4O95219 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX4O95219 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.11■□□□□ 0.33
SNX4O95219 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.11■□□□□ 0.33
SNX4O95219 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX4O95219 TSPY5P-201ENST00000426936 936 ntBASIC17.11■□□□□ 0.33
SNX4O95219 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.11■□□□□ 0.33
SNX4O95219 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX4O95219 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.11■□□□□ 0.33
SNX4O95219 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX4O95219 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX4O95219 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX4O95219 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.11■□□□□ 0.33
SNX4O95219 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX4O95219 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX4O95219 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms