Protein–RNA interactions for Protein: O94911

ABCA8, ATP-binding cassette sub-family A member 8, humanhuman

Predictions only

Length 1,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8O94911 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ABCA8O94911 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ABCA8O94911 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
ABCA8O94911 PRYP5-201ENST00000451909 266 ntBASIC28.2■■■□□ 2.1
ABCA8O94911 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC28.2■■■□□ 2.1
ABCA8O94911 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC28.2■■■□□ 2.1
ABCA8O94911 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC28.2■■■□□ 2.1
ABCA8O94911 MIR4469-201ENST00000583919 79 ntBASIC28.2■■■□□ 2.1
ABCA8O94911 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ABCA8O94911 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ABCA8O94911 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
ABCA8O94911 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
ABCA8O94911 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ABCA8O94911 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ABCA8O94911 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
ABCA8O94911 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC28.19■■■□□ 2.1
ABCA8O94911 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ABCA8O94911 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ABCA8O94911 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
ABCA8O94911 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC28.19■■■□□ 2.1
ABCA8O94911 AC005593.1-201ENST00000624894 515 ntBASIC28.19■■■□□ 2.1
ABCA8O94911 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC28.19■■■□□ 2.1
ABCA8O94911 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC28.19■■■□□ 2.1
ABCA8O94911 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ABCA8O94911 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA8O94911 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA8O94911 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC28.18■■■□□ 2.1
ABCA8O94911 AC005829.1-201ENST00000570002 483 ntBASIC28.18■■■□□ 2.1
ABCA8O94911 TCAP-202ENST00000578283 583 ntTSL 5 BASIC28.18■■■□□ 2.1
ABCA8O94911 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC28.18■■■□□ 2.1
ABCA8O94911 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC28.18■■■□□ 2.1
ABCA8O94911 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA8O94911 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA8O94911 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC28.17■■■□□ 2.1
ABCA8O94911 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ABCA8O94911 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC28.17■■■□□ 2.1
ABCA8O94911 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC28.17■■■□□ 2.1
ABCA8O94911 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ABCA8O94911 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC28.17■■■□□ 2.1
ABCA8O94911 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC28.17■■■□□ 2.1
ABCA8O94911 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
ABCA8O94911 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
ABCA8O94911 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ABCA8O94911 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ABCA8O94911 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC28.17■■■□□ 2.1
ABCA8O94911 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC28.17■■■□□ 2.1
ABCA8O94911 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ABCA8O94911 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC28.17■■■□□ 2.1
ABCA8O94911 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC28.16■■■□□ 2.1
ABCA8O94911 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA8O94911 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA8O94911 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA8O94911 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA8O94911 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
ABCA8O94911 HCG4B-203ENST00000450128 991 ntBASIC28.16■■■□□ 2.1
ABCA8O94911 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA8O94911 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA8O94911 AL513190.1-201ENST00000621254 727 ntBASIC28.16■■■□□ 2.1
ABCA8O94911 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC28.16■■■□□ 2.1
ABCA8O94911 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA8O94911 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC28.16■■■□□ 2.1
ABCA8O94911 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA8O94911 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA8O94911 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA8O94911 ADM-208ENST00000534464 1640 ntTSL 2 BASIC28.16■■■□□ 2.1
ABCA8O94911 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
ABCA8O94911 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA8O94911 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
ABCA8O94911 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC28.16■■■□□ 2.1
ABCA8O94911 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC28.16■■■□□ 2.1
ABCA8O94911 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
ABCA8O94911 AC018845.2-201ENST00000568326 409 ntBASIC28.16■■■□□ 2.1
ABCA8O94911 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
ABCA8O94911 AC093484.2-201ENST00000580996 2166 ntBASIC28.16■■■□□ 2.1
ABCA8O94911 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA8O94911 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA8O94911 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC28.15■■■□□ 2.1
ABCA8O94911 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA8O94911 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA8O94911 BID-204ENST00000399767 2129 ntTSL 2 BASIC28.15■■■□□ 2.1
ABCA8O94911 ATP6V0CP3-201ENST00000417255 467 ntBASIC28.15■■■□□ 2.1
ABCA8O94911 PON3-203ENST00000427422 894 ntTSL 3 BASIC28.15■■■□□ 2.1
ABCA8O94911 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC28.15■■■□□ 2.1
ABCA8O94911 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA8O94911 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA8O94911 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC28.15■■■□□ 2.1
ABCA8O94911 AC148477.5-201ENST00000625164 1645 ntBASIC28.14■■■□□ 2.1
ABCA8O94911 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
ABCA8O94911 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
ABCA8O94911 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
ABCA8O94911 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC28.14■■■□□ 2.1
ABCA8O94911 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
ABCA8O94911 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC28.14■■■□□ 2.1
ABCA8O94911 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC28.14■■■□□ 2.1
ABCA8O94911 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC28.14■■■□□ 2.1
ABCA8O94911 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC28.14■■■□□ 2.1
ABCA8O94911 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
ABCA8O94911 ORC5-208ENST00000626700 344 ntTSL 3 BASIC28.14■■■□□ 2.1
ABCA8O94911 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC28.14■■■□□ 2.09
ABCA8O94911 AC004817.3-201ENST00000602957 2129 ntBASIC28.14■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms