Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 SLC25A3P1-201ENST00000443844 931 ntBASIC18.11■□□□□ 0.49
KLHL41O60662 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.11■□□□□ 0.49
KLHL41O60662 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
KLHL41O60662 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.11■□□□□ 0.49
KLHL41O60662 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.11■□□□□ 0.49
KLHL41O60662 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.11■□□□□ 0.49
KLHL41O60662 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.11■□□□□ 0.49
KLHL41O60662 AL445228.2-201ENST00000605589 952 ntBASIC18.11■□□□□ 0.49
KLHL41O60662 AC010947.1-201ENST00000623454 693 ntBASIC18.11■□□□□ 0.49
KLHL41O60662 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.11■□□□□ 0.49
KLHL41O60662 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KLHL41O60662 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KLHL41O60662 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.11■□□□□ 0.49
KLHL41O60662 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.11■□□□□ 0.49
KLHL41O60662 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KLHL41O60662 AC138028.4-201ENST00000564984 1845 ntBASIC18.11■□□□□ 0.49
KLHL41O60662 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.11■□□□□ 0.49
KLHL41O60662 REXO1L9P-201ENST00000604264 2108 ntBASIC18.11■□□□□ 0.49
KLHL41O60662 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.11■□□□□ 0.49
KLHL41O60662 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
KLHL41O60662 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.11■□□□□ 0.49
KLHL41O60662 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
KLHL41O60662 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
KLHL41O60662 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KLHL41O60662 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KLHL41O60662 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KLHL41O60662 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KLHL41O60662 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KLHL41O60662 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
KLHL41O60662 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KLHL41O60662 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KLHL41O60662 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KLHL41O60662 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KLHL41O60662 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KLHL41O60662 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
KLHL41O60662 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KLHL41O60662 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KLHL41O60662 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.1■□□□□ 0.49
KLHL41O60662 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.1■□□□□ 0.49
KLHL41O60662 LINC01238-205ENST00000567549 1107 ntBASIC18.1■□□□□ 0.49
KLHL41O60662 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.1■□□□□ 0.49
KLHL41O60662 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.1■□□□□ 0.49
KLHL41O60662 MYC-208ENST00000641036 567 ntBASIC18.1■□□□□ 0.49
KLHL41O60662 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KLHL41O60662 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KLHL41O60662 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.1■□□□□ 0.49
KLHL41O60662 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KLHL41O60662 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
KLHL41O60662 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
KLHL41O60662 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KLHL41O60662 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KLHL41O60662 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.1■□□□□ 0.49
KLHL41O60662 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KLHL41O60662 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.09■□□□□ 0.49
KLHL41O60662 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KLHL41O60662 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
KLHL41O60662 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.09■□□□□ 0.49
KLHL41O60662 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.09■□□□□ 0.49
KLHL41O60662 KRT8P32-201ENST00000512863 1461 ntBASIC18.09■□□□□ 0.49
KLHL41O60662 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KLHL41O60662 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KLHL41O60662 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
KLHL41O60662 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KLHL41O60662 TSPY14P-201ENST00000303979 915 ntBASIC18.09■□□□□ 0.49
KLHL41O60662 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
KLHL41O60662 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KLHL41O60662 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KLHL41O60662 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.09■□□□□ 0.49
KLHL41O60662 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
KLHL41O60662 B3GAT3P1-201ENST00000471720 806 ntBASIC18.09■□□□□ 0.49
KLHL41O60662 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.09■□□□□ 0.49
KLHL41O60662 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.09■□□□□ 0.49
KLHL41O60662 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.09■□□□□ 0.49
KLHL41O60662 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.09■□□□□ 0.49
KLHL41O60662 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.09■□□□□ 0.49
KLHL41O60662 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
KLHL41O60662 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.09■□□□□ 0.49
KLHL41O60662 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.09■□□□□ 0.49
KLHL41O60662 AL357033.4-201ENST00000617703 1807 ntBASIC18.09■□□□□ 0.49
KLHL41O60662 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KLHL41O60662 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.09■□□□□ 0.49
KLHL41O60662 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KLHL41O60662 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KLHL41O60662 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KLHL41O60662 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KLHL41O60662 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
KLHL41O60662 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KLHL41O60662 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.08■□□□□ 0.49
KLHL41O60662 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.08■□□□□ 0.49
KLHL41O60662 AC112777.1-201ENST00000540175 1423 ntBASIC18.08■□□□□ 0.49
KLHL41O60662 KRT8P9-201ENST00000558927 1449 ntBASIC18.08■□□□□ 0.49
KLHL41O60662 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KLHL41O60662 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
KLHL41O60662 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.08■□□□□ 0.49
KLHL41O60662 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KLHL41O60662 TERF1P1-201ENST00000311003 1181 ntBASIC18.08■□□□□ 0.48
KLHL41O60662 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.08■□□□□ 0.48
KLHL41O60662 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
KLHL41O60662 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KLHL41O60662 AC097488.1-201ENST00000507834 756 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms